The Mariana snailfish or Mariana hadal snailfish Pseudoliparis swirei is a species of snailfish found in the Mariana Trench in the western Pacific Ocean. It is known from a depth range of 6,198–8,076 m,which is possibly the record for a fish caught on the seafloor. Various anatomical, physiological, molecular and genetic adaptions help this species survive in such depths. It is abundant in their deep-sea habitat and has several unusual adaptions for its dark and high pressure habitat, including transparent skin that lacks pigment, certain organs and eggs that are enlarged, the muscles are thinner, the ossification of its bones (notably the skull) is incomplete.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Pseudoliparis swirei | Chordata | hadal snailfish | Deep sea | 7,254 | the Mariana Trench (142°26′E, 11°07′N) | 2059687 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
NWPU_hadal_v1 | 626.4Mb | Chromosome | 2023 | JANBZZ01 | Northwestern Polytechnical University | PRJNA852951 | 96.00% | 21,161 |
Title | Journal | Pubmed ID |
---|---|---|
Chromosome-level genome assembly of hadal snailfish reveals mechanisms of deep-sea adaptation in vertebrates | Elife | 38134226 |
Gene ID | Description |
---|---|
HS05451 | BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE |
HS05452 | UPF0183 PROTEIN |
HS05453 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
HS05454 | CORE-BINDING FACTOR, BETA SUBUNIT |
HS05455 | GTP-BINDING PROTEIN ALPHA SUBUNIT |
HS05456 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
HS05457 | HEAT SHOCK TRANSCRIPTION FACTOR |
HS05458 | CYTOCHROME P450 508A4-RELATED |
HS05459 | CYTOCHROME P450 508A4-RELATED |
HS05460 | HISTONE H4 |
HS05461 | HISTONE H2B |
HS05462 | HISTONE H4 |
HS05463 | HISTONE H2B |
HS05464 | HISTONE H1 |
HS05465 | HISTONE H4 |
HS05466 | HISTONE H2B |
HS05467 | HISTONE H4 |
HS05468 | EXOSOME COMPLEX COMPONENT |
HS05469 | ALANYL-TRNA SYNTHETASE |
HS05470 | ALPHA-2,3-SIALYLTRANSFERASE ST3GAL I ISOFORM X1 |
HS05471 | |
HS05472 | DNA REPAIR/RNA PROCESSING CPSF FAMILY |
HS05473 | INTERLEUKIN-34 |
HS05474 | ATP DEPENDENT LON PROTEASE FAMILY MEMBER |
HS05475 | |
HS05476 | |
HS05477 | E3 UBIQUITIN-PROTEIN LIGASE SIAH2 |
HS05478 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
HS05479 | DNA REPAIR/RNA PROCESSING CPSF FAMILY |
HS05480 | N4BP1-RELATED |
HS05481 | CEREBELLIN-RELATED |
HS05482 | |
HS05483 | TRANSCRIPTIONAL REPRESSOR CTCFL-RELATED |
HS05484 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
HS05485 | NUCLEAR RECEPTOR COACTIVATOR 5-RELATED |
HS05486 | CCR4-NOT TRANSCRIPTION COMPLEX |
HS05487 | |
HS05488 | UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE |
HS05489 | UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE |
HS05490 | HISTONE H2B |
HS05491 | HISTONE H4 |
HS05492 | HISTONE H2B |
HS05493 | HISTONE H1 |
HS05494 | |
HS05495 | HISTONE H2B |
HS05496 | HISTONE H3 |
HS05497 | NEFA-INTERACTING NUCLEAR PROTEIN NIP30 |
HS05498 | COPINE |
HS05499 | RAN GTPASE-ACTIVATING PROTEIN 1 |
HS05500 | MYOSIN HEAVY CHAIN, NON-MUSCLE |