About Pseudoliparis swirei

The Mariana snailfish or Mariana hadal snailfish Pseudoliparis swirei is a species of snailfish found in the Mariana Trench in the western Pacific Ocean. It is known from a depth range of 6,198–8,076 m,which is possibly the record for a fish caught on the seafloor. Various anatomical, physiological, molecular and genetic adaptions help this species survive in such depths. It is abundant in their deep-sea habitat and has several unusual adaptions for its dark and high pressure habitat, including transparent skin that lacks pigment, certain organs and eggs that are enlarged, the muscles are thinner, the ossification of its bones (notably the skull) is incomplete.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Pseudoliparis swireiChordatahadal snailfishDeep sea7,254the Mariana Trench (142°26′E, 11°07′N)2059687

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
NWPU_hadal_v1626.4MbChromosome2023JANBZZ01Northwestern Polytechnical UniversityPRJNA85295196.00%21,161

References
TitleJournalPubmed ID
Chromosome-level genome assembly of hadal snailfish reveals mechanisms of deep-sea adaptation in vertebratesElife38134226

Gene Information

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Gene IDDescription
HS05351
HS05352ELECTRON TRANSFER FLAVOPROTEIN BETA SUBUNIT LYSINE METHYLTRANSFERASE
HS05353CARBOHYDRATE SULFOTRANSFERASE
HS05354SIGNALING LYMPHOCYTIC ACTIVATION MOLECULE
HS05355TRANSCRIPTION TERMINATION FACTOR, MITOCHONDRIAL
HS05356DIHYDROFOLATE REDUCTASE
HS05357CRYPTOCHROME
HS05358ANKYRIN REPEAT AND BTB/POZ DOMAIN-CONTAINING
HS05359MEMBRANE PROTEIN MLC1
HS05360PANNEXIN
HS05361PHEROMONE SHUTDOWN PROTEIN
HS05362SELENOPROTEIN O
HS05363MITOGEN-ACTIVATED PROTEIN KINASE
HS05364
HS05365ACTIN BUNDLING/MISSING IN METASTASIS-RELATED
HS05366CADHERIN-23
HS05367ENDONUCLEASE-RELATED
HS05368TEASHIRT-RELATED
HS05369ZINC FINGER PROTEIN
HS05370RNA POLYMERASE II SUBUNIT 5-MEDIATING PROTEIN NNX3
HS05371NAZO FAMILY MEMBER
HS05372CYTOCHROME B-C1 COMPLEX SUBUNIT RIESKE, MITOCHONDRIAL
HS05373RIBITOL-5-PHOSPHATE XYLOSYLTRANSFERASE 1
HS05374SLIT-ROBO RHO GTPASE ACTIVATING PROTEIN
HS05375
HS05376UNCHARACTERIZED
HS05377POLY [ADP-RIBOSE] POLYMERASE
HS05378CYTOCHROME P450 FAMILY 3
HS05379POLY [ADP-RIBOSE] POLYMERASE
HS05380DUAL SPECIFICITY PROTEIN KINASE
HS05381UNCHARACTERIZED
HS05382CALPONIN HOMOLOGY DOMAIN-CONTAINING PROTEIN DDB_G0272472-RELATED
HS05383TETRATRICOPEPTIDE REPEAT PROTEIN 38
HS05384TETRASPANIN
HS05385TETRASPANIN
HS05386
HS05387PROTEIN ARGININE N-METHYLTRANSFERASE
HS05388RAS-RELATED PROTEIN RAB
HS05389PROTEIN O-MANNOSYL-TRANSFERASE TMTC2
HS05390PROTEIN FAM180A-RELATED
HS05391XANTHINE-URACIL / VITAMIN C PERMEASE FAMILY MEMBER
HS05392BICAUDAL D FAMILY MEMBER
HS05393FACIOGENITAL DYSPLASIA PROTEIN
HS05394NUCLEAR PORE COMPLEX PROTEIN NUP205
HS05395SPHINGOSINE KINASE
HS05396LATE SECRETORY PATHWAY PROTEIN AVL9-RELATED
HS05397EUKARYOTIC TRANSLATION INITIATION FACTOR 2-ALPHA KINASE EIF2-ALPHA KINASE -RELATED
HS05398BH3-INTERACTING DOMAIN DEATH AGONIST
HS05399BCL-2-LIKE PROTEIN 13
HS05400ATPASE H+-TRANSPORTING V1 SUBUNIT E1A-RELATED
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