About Pseudoliparis swirei

The Mariana snailfish or Mariana hadal snailfish Pseudoliparis swirei is a species of snailfish found in the Mariana Trench in the western Pacific Ocean. It is known from a depth range of 6,198–8,076 m，which is possibly the record for a fish caught on the seafloor. Various anatomical, physiological, molecular and genetic adaptions help this species survive in such depths. It is abundant in their deep-sea habitat and has several unusual adaptions for its dark and high pressure habitat, including transparent skin that lacks pigment, certain organs and eggs that are enlarged, the muscles are thinner, the ossification of its bones (notably the skull) is incomplete.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Pseudoliparis swireiChordatahadal snailfishDeep sea7,254the Mariana Trench (142°26′E, 11°07′N)2059687

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
NWPU_hadal_v1626.4MbChromosome2023JANBZZ01Northwestern Polytechnical UniversityPRJNA85295196.00%21,161

References
TitleJournalPubmed ID
Chromosome-level genome assembly of hadal snailfish reveals mechanisms of deep-sea adaptation in vertebratesElife38134226

Gene Information

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Gene IDDescription
HS05201FERM DOMAIN-CONTAINING PROTEIN 4
HS05202TRANSMEMBRANE PROTEIN 253
HS05203CADHERIN-23
HS05204PROTEIN PHOSPHATASE 2C
HS05205TELOMERE REPEATS-BINDING BOUQUET FORMATION PROTEIN 1
HS05206
HS05207OVOCHYMASE-RELATED
HS05208SH3 AND MULTIPLE ANKYRIN REPEAT DOMAINS PROTEIN
HS05209ADP RIBOSYLATION FACTOR-RELATED
HS05210SHIPPO-1-RELATED
HS05211-
HS05212SH3 AND MULTIPLE ANKYRIN REPEAT DOMAINS PROTEIN
HS05213ARYLSULFATASE FAMILY MEMBER
HS05214JNK-INTERACTING PROTEIN 1-LIKE PROTEIN
HS05215ZONA PELLUCIDA SPERM-BINDING PROTEIN
HS05216BETA-SITE APP-CLEAVING ENZYME, ISOFORM A-RELATED
HS05217ZONA PELLUCIDA SPERM-BINDING PROTEIN 3
HS05218CHOLINE/ETHANOALAMINE KINASE
HS05219BTB_2 DOMAIN-CONTAINING PROTEIN
HS05220CARNITINE O-ACYLTRANSFERASE
HS05221SELENIDE, WATER DIKINASE
HS05222BEN DOMAIN-CONTAINING PROTEIN 7
HS05223PRE-MRNA SPLICING FACTOR-RELATED
HS05224
HS05225TRANSCRIPTION FACTOR MAF
HS05226RETINOL DEHYDROGENASE
HS05227NFAT
HS05228NUDIX HYDROLASE
HS05229HYPOXANTHINE-GUANINE PHOSPHORIBOSYLTRANSFERASE
HS05230DYNEIN LIGHT CHAIN ROADBLOCK
HS05231EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT F-RELATED
HS05232GENETIC SUPPRESSOR ELEMENT 1
HS05233UNCHARACTERIZED
HS05234ELKS/RAB6-INTERACTING/CAST PROTEIN
HS05235SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED
HS05236DNA REPAIR AND RECOMBINATION PROTEIN RAD52, RAD59
HS05237ZINC FINGER PROTEIN
HS05238TARGET OF RAPAMYCIN COMPLEX 2 SUBUNIT BIT61-RELATED
HS05239FAM11A, B PROTEIN
HS05240ROUND SPERMATID BASIC PROTEIN 1
HS05241FIBRINOGEN/TENASCIN/ANGIOPOEITIN
HS05242-
HS05243MITOCHONDRIAL ATP SYNTHASE COUPLING FACTOR B
HS05244SYNAPTIC ADHESION-LIKE MOLECULE SALM
HS05245ARMADILLO REPEAT CONTAINING PROTEIN
HS05246PINSTRIPE, ISOFORM A
HS05247UNCHARACTERIZED
HS05248UNCHARACTERIZED
HS05249ENDOPLASMIC RETICULUM-GOLGI INTERMEDIATE COMPARTMENT PROTEIN
HS05250MEMBRANE ASSOCIATED GUANYLATE KINASE-RELATED
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