About Pseudoliparis swirei

The Mariana snailfish or Mariana hadal snailfish Pseudoliparis swirei is a species of snailfish found in the Mariana Trench in the western Pacific Ocean. It is known from a depth range of 6,198–8,076 m，which is possibly the record for a fish caught on the seafloor. Various anatomical, physiological, molecular and genetic adaptions help this species survive in such depths. It is abundant in their deep-sea habitat and has several unusual adaptions for its dark and high pressure habitat, including transparent skin that lacks pigment, certain organs and eggs that are enlarged, the muscles are thinner, the ossification of its bones (notably the skull) is incomplete.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Pseudoliparis swireiChordatahadal snailfishDeep sea7,254the Mariana Trench (142°26′E, 11°07′N)2059687

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
NWPU_hadal_v1626.4MbChromosome2023JANBZZ01Northwestern Polytechnical UniversityPRJNA85295196.00%21,161

References
TitleJournalPubmed ID
Chromosome-level genome assembly of hadal snailfish reveals mechanisms of deep-sea adaptation in vertebratesElife38134226

Gene Information

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Gene IDDescription
HS05001ANOCTAMIN
HS05002SMALL VCP/P97-INTERACTING PROTEIN
HS05003TRANSGELIN
HS05004FANCONI ANEMIA GROUP F PROTEIN FANCF
HS05005SOLUTE CARRIER FAMILY 17
HS05006PURINOCEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR
HS05007ANOCTAMIN
HS05008ANOCTAMIN
HS05009INTERLEUKIN-1 RECEPTOR FAMILY MEMBER
HS05010PLAKOPHILLIN-RELATED
HS05011TETRASPANIN
HS05012VOLTAGE-GATED POTASSIUM CHANNEL
HS05013REGULATOR OF CHROMOSOME CONDENSATION
HS05014AROMATIC AMINO ACID HYDROXYLASE
HS05015SERUM AMYLOID A
HS05016EXTRACELLULAR MATRIX GLYCOPROTEIN RELATED
HS05017EXTRACELLULAR MATRIX GLYCOPROTEIN RELATED
HS05018TRANSCRIPTION INITIATION FACTOR IIH-RELATED
HS05019RUBY-EYE2-LIKE PROTEIN
HS05020OXIDASE/PEROXIDASE
HS05021OXIDASE/PEROXIDASE
HS05022RABIN3-RELATED
HS05023BESTROPHIN
HS05024INNER CENTROMERE PROTEIN
HS05025GLYCOSYL HYDROLASE-RELATED
HS05026PROTEIN PHOSPHATASE 1 REGULATORY SUBUNIT 12
HS05027POL PROTEIN
HS05028CALCIUM-INDEPENDENT PHOSPHOLIPASE A2 IPLA2 -RELATED
HS05029MITOCHONDRIAL 2-OXODICARBOXYLATE CARRIER 1-RELATED
HS05030SYNAPTOTAGMIN
HS05031PROTEIN PHOSPHATASE 1 REGULATORY SUBUNIT 32
HS05032-
HS05033EPIDERMAL GROWTH FACTOR RECEPTOR KINASE SUBSTRATE EPS8-RELATED PROTEIN
HS05034FATTY ACID DESATURASE 2
HS05035UNCHARACTERIZED
HS05036UNCHARACTERIZED
HS05037UNCHARACTERIZED
HS05038RAS-RELATED PROTEIN RAB
HS05039TETRASPANIN
HS05040PROTEIN/NUCLEIC ACID DEGLYCASE DJ-1-RELATED
HS05041CHITINASE DOMAIN-CONTAINING PROTEIN 1 FAMILY MEMBER
HS05042DNA2/NAM7 HELICASE FAMILY MEMBER
HS05043KINESIN-RELATED
HS05044E3 UBIQUITIN-PROTEIN LIGASE TRIM
HS0504543 KDA RECEPTOR-ASSOCIATED PROTEIN OF THE SYNAPSE
HS05046KELCH REPEAT AND BTB DOMAIN-CONTAINING PROTEIN 4
HS05047DAMAGE-SPECIFIC DNA BINDING PROTEIN 2
HS05048TRANSDUCIN-LIKE ENHANCER PROTEIN
HS05049MORTALITY FACTOR 4-LIKE PROTEIN
HS05050ZINC FINGER MIZ DOMAIN-CONTAINING PROTEIN
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