About Pseudoliparis swirei

The Mariana snailfish or Mariana hadal snailfish Pseudoliparis swirei is a species of snailfish found in the Mariana Trench in the western Pacific Ocean. It is known from a depth range of 6,198–8,076 m,which is possibly the record for a fish caught on the seafloor. Various anatomical, physiological, molecular and genetic adaptions help this species survive in such depths. It is abundant in their deep-sea habitat and has several unusual adaptions for its dark and high pressure habitat, including transparent skin that lacks pigment, certain organs and eggs that are enlarged, the muscles are thinner, the ossification of its bones (notably the skull) is incomplete.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Pseudoliparis swireiChordatahadal snailfishDeep sea7,254the Mariana Trench (142°26′E, 11°07′N)2059687

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
NWPU_hadal_v1626.4MbChromosome2023JANBZZ01Northwestern Polytechnical UniversityPRJNA85295196.00%21,161

References
TitleJournalPubmed ID
Chromosome-level genome assembly of hadal snailfish reveals mechanisms of deep-sea adaptation in vertebratesElife38134226

Gene Information

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Gene IDDescription
HS04951GPI-ANCHORED PROTEIN P137
HS04952N-ACETYLTRANSFERASE 10
HS04953ADENOSINE DEAMINASE
HS04954TYROSINE-PROTEIN KINASE
HS04955UNCHARACTERIZED
HS04956
HS04957AT-RICH INTERACTIVE DOMAIN-CONTAINING PROTEIN ARID DOMAIN- CONTAINING PROTEIN DEAD RINGER PROTEIN B-CELL REGULATOR OF IGH TRANSCRIPTION BRIGHT
HS04958CYTOCHROME C OXIDASE POLYPEPTIDE
HS04959
HS04960POLY ADP-RIBOSE POLYMERASE FAMILY, MEMBER PARP
HS04961PYRUVATE KINASE
HS04962
HS04963BASIGIN RELATED
HS04964EG:EG0003.4 PROTEIN-RELATED
HS04965
HS04966SECRETORY CARRIER-ASSOCIATED MEMBRANE PROTEIN SCAMP
HS04967POLY ADP-RIBOSE POLYMERASE FAMILY, MEMBER PARP
HS04968INSULIN-LIKE GROWTH FACTOR BINDING PROTEIN-RELATED
HS04969DULLARD PROTEIN PHOSPHATASE
HS04970SULFIDE:QUINONE OXIDOREDUCTASE
HS04971PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE
HS04972MEVALONATE KINASE/GALACTOKINASE
HS04973SHC TRANSFORMING PROTEIN
HS04974LONG-CHAIN FATTY ACID TRANSPORT PROTEIN
HS04975TIGHT JUNCTION PROTEIN
HS04976NADPH OXIDASE
HS04977DUAL OXIDASE 2
HS04978ADAM10/ADAM17 METALLOPEPTIDASE FAMILY MEMBER
HS04979SYNTENIN RELATED
HS04980FANCONI-ASSOCIATED NUCLEASE 1
HS04981AQUAPORIN OR AQUAGLYCEROPORIN RELATED
HS04982CINGULIN-LIKE PROTEIN 1-RELATED
HS04983BASIC HELIX-LOOP-HELIX TRANSCRIPTION FACTOR
HS04984RFX TRANSCRIPTION FACTOR FAMILY
HS04985PROTEIN SIDEKICK
HS0498660S RIBOSOMAL PROTEIN L24
HS04987ENDOSULFINE
HS04988MYOSIN
HS04989MYOSIN
HS04990GUANINE NUCLEOTIDE-BINDING PROTEIN BETA G PROTEIN BETA
HS04991ADAPTIN, ALPHA/GAMMA/EPSILON
HS04992CYTOCHROME P450 FAMILY 4
HS04993OLFACTOMEDIN-RELATED
HS04994ATP-DEPENDENT CLP PROTEASE ATP-BINDING SUBUNIT CLPX-LIKE, MITOCHONDRIAL-RELATED
HS04995
HS04996
HS04997PROTEIN REGULATOR OF CYTOKINESIS 1 PRC1-RELATED
HS04998ETS
HS04999TRANSMEMBRANE PROTEIN 178B-RELATED
HS05000FIN BUD INITIATION FACTOR FIBIN
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