About Pseudoliparis swirei

The Mariana snailfish or Mariana hadal snailfish Pseudoliparis swirei is a species of snailfish found in the Mariana Trench in the western Pacific Ocean. It is known from a depth range of 6,198–8,076 m,which is possibly the record for a fish caught on the seafloor. Various anatomical, physiological, molecular and genetic adaptions help this species survive in such depths. It is abundant in their deep-sea habitat and has several unusual adaptions for its dark and high pressure habitat, including transparent skin that lacks pigment, certain organs and eggs that are enlarged, the muscles are thinner, the ossification of its bones (notably the skull) is incomplete.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Pseudoliparis swireiChordatahadal snailfishDeep sea7,254the Mariana Trench (142°26′E, 11°07′N)2059687

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
NWPU_hadal_v1626.4MbChromosome2023JANBZZ01Northwestern Polytechnical UniversityPRJNA85295196.00%21,161

References
TitleJournalPubmed ID
Chromosome-level genome assembly of hadal snailfish reveals mechanisms of deep-sea adaptation in vertebratesElife38134226

Gene Information

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Gene IDDescription
HS05651UNCHARACTERIZED
HS05652OLFACTOMEDIN-RELATED
HS05653
HS05654SPHINGOMYELINASE FAMILY MEMBER
HS05655SEPTIN
HS05656
HS05657EXOCYST COMPLEX COMPONENT SEC6-RELATED
HS05658TERF1-INTERACTING NUCLEAR FACTOR 2
HS05659PEPTIDE DEFORMYLASE
HS05660PROTEIN CBG26694
HS05661PROTEIN ARGININE N-METHYLTRANSFERASE
HS05662ANAMORSIN
HS05663UBIQUINONE BIOSYNTHESIS PROTEIN COQ9, MITOCHONDRIAL
HS05664DNA-DIRECTED RNA POLYMERASE
HS05665HECT DOMAIN UBIQUITIN-PROTEIN LIGASE
HS05666
HS05667TRNA-SPECIFIC ADENOSINE DEAMINASE 1
HS05668REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
HS05669REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
HS05670SYNTROPHIN
HS05671AAA DOMAIN-CONTAINING
HS05672CELL DIVISION PROTEIN KINASE
HS05673CHARGED MULTIVESICULAR BODY PROTEIN
HS05674SODIUM-BILE ACID COTRANSPORTER
HS05675FANCONI ANEMIA GROUP A PROTEIN
HS05676KRUEPPEL-LIKE TRANSCRIPTION FACTOR
HS05677RAB GDP/GTP EXCHANGE FACTOR
HS05678SHORT-CHAIN DEHYDROGENASE/REDUCTASE
HS05679ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
HS05680SPERMATOGENESIS-ASSOCIATED PROTEIN 2/TAMOZHENNIC
HS05681PHOSPHOINOSITIDE-SPECIFIC PHOSPHOLIPASE C FAMILY PROTEIN
HS05682REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
HS05683ZINC FINGER PROTEIN ZIC AND GLI
HS05684KRUEPPEL-LIKE TRANSCRIPTION FACTOR
HS05685
HS05686REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
HS05687ZINC FINGER PROTEIN ZIC AND GLI
HS05688GALANIN
HS05689REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
HS05690
HS05691
HS05692ZINC FINGER PROTEIN
HS05693NUCLEOLAR PROTEIN 7/ESTROGEN RECEPTOR COACTIVATOR-RELATED
HS05694PR DOMAIN ZINC FINGER PROTEIN
HS05695NUCLEOLAR PROTEIN 7/ESTROGEN RECEPTOR COACTIVATOR-RELATED
HS05696CRANIOFACIAL DEVELOPMENT PROTEIN 1
HS05697CAS SCAFFOLDING PROTEIN
HS05698SHORT-CHAIN DEHYDROGENASE/REDUCTASE
HS05699CYCLINS
HS05700VITELLOGENIN RECEPTOR-LIKE PROTEIN-RELATED-RELATED
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