Geodia barretti is a species of deep-sea sponge in the family Geodiidae, commonly found in cold-water ecosystems of the North Atlantic Ocean. This species thrives in nutrient-rich, cold-water environments and plays a crucial role in deep-sea ecosystems by filtering large volumes of water, contributing to nutrient cycling, and providing habitat for various marine organisms. Its unique adaptations to cold and high-pressure conditions make it an important subject for studying deep-sea biodiversity and ecological processes.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Geodia barretti | Porifera | deep-sea sponge | Deep sea | 30-2000 | Kosterfjord National Park, Sweden, West of Yttre Vattenholmen (58.876233, 11.101483) | 519541 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| Geodia_barretti_n_2022_12 | 144.8Mb | Scaffold | 2024 | CASHTH01 | pharmaceutical biosciences, uppsala university | PRJEB58046 | 71.50% | 31,884 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Whole genome sequence of the deep-sea sponge Geodia barretti (Metazoa, Porifera, Demospongiae) | G3 (Bethesda) | 37619978 |
| Gene ID | Description |
|---|---|
| CAI8058119.1 | PA-PL1 PHOSPHOLIPASE FAMILY |
| CAI8058122.1 | PA-PL1 PHOSPHOLIPASE FAMILY |
| CAI8058123.1 | PA-PL1 PHOSPHOLIPASE FAMILY |
| CAI8058124.1 | |
| CAI8058126.1 | PROTEIN ARGININE N-METHYLTRANSFERASE |
| CAI8058125.1 | PROTEIN ARGININE N-METHYLTRANSFERASE |
| CAI8058127.1 | PROTEIN ARGININE N-METHYLTRANSFERASE |
| CAI8058128.1 | PROTEIN ARGININE N-METHYLTRANSFERASE |
| CAI8058129.1 | TRANSCRIPTION INITIATION FACTOR TFIID |
| CAI8058131.1 | |
| CAI8058130.1 | |
| CAI8058132.1 | |
| CAI8058133.1 | |
| CAI8058134.1 | ALKALINE CERAMIDASE 3 |
| CAI8058135.1 | ALKALINE CERAMIDASE 3 |
| CAI8058136.1 | ALKALINE CERAMIDASE 3 |
| CAI8058137.1 | ALKALINE CERAMIDASE 3 |
| CAI8058138.1 | |
| CAI8058139.1 | ALKALINE CERAMIDASE 3 |
| CAI8058140.1 | 1-PHOSPHATIDYLINOSITOL 3-PHOSPHATE 5-KINASE |
| CAI8058142.1 | HISTIDINE TRIAD HIT PROTEIN |
| CAI8058141.1 | HISTIDINE TRIAD HIT PROTEIN |
| CAI8058144.1 | HISTIDINE TRIAD HIT PROTEIN |
| CAI8058143.1 | HISTIDINE TRIAD HIT PROTEIN |
| CAI8058145.1 | |
| CAI8058146.1 | |
| CAI8058147.1 | |
| CAI8058148.1 | |
| CAI8058150.1 | |
| CAI8058149.1 | |
| CAI8058151.1 | |
| CAI8058154.1 | EUKARYOTIC TRANSLATION INITIATION FACTOR 2 SUBUNIT 3 FAMILY MEMBER |
| CAI8058153.1 | EUKARYOTIC TRANSLATION INITIATION FACTOR 2 SUBUNIT 3 FAMILY MEMBER |
| CAI8058152.1 | EUKARYOTIC TRANSLATION INITIATION FACTOR 2 SUBUNIT 3 FAMILY MEMBER |
| CAI8058155.1 | EUKARYOTIC TRANSLATION INITIATION FACTOR 2 SUBUNIT 3 FAMILY MEMBER |
| CAI8058156.1 | EUKARYOTIC TRANSLATION INITIATION FACTOR 2 SUBUNIT 3 FAMILY MEMBER |
| CAI8058157.1 | |
| CAI8058160.1 | CYSTEINE AND HISTIDINE-RICH DOMAIN-CONTAINING PROTEIN 1 |
| CAI8058161.1 | CYSTEINE AND HISTIDINE-RICH DOMAIN-CONTAINING PROTEIN 1 |
| CAI8058159.1 | CYSTEINE AND HISTIDINE-RICH DOMAIN-CONTAINING PROTEIN 1 |
| CAI8058158.1 | CYSTEINE AND HISTIDINE-RICH DOMAIN-CONTAINING PROTEIN 1 |
| CAI8058162.1 | PEPTIDASE S8 |
| CAI8058163.1 | PEPTIDASE S8 |
| CAI8058165.1 | T-CELL ACTIVATION RHO GTPASE ACTIVATING PROTEIN-RELATED |
| CAI8058164.1 | T-CELL ACTIVATION RHO GTPASE ACTIVATING PROTEIN-RELATED |
| CAI8058166.1 | |
| CAI8058170.1 | |
| CAI8058169.1 | |
| CAI8058168.1 | |
| CAI8058167.1 |
