Geodia barretti is a species of deep-sea sponge in the family Geodiidae, commonly found in cold-water ecosystems of the North Atlantic Ocean. This species thrives in nutrient-rich, cold-water environments and plays a crucial role in deep-sea ecosystems by filtering large volumes of water, contributing to nutrient cycling, and providing habitat for various marine organisms. Its unique adaptations to cold and high-pressure conditions make it an important subject for studying deep-sea biodiversity and ecological processes.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Geodia barretti | Porifera | deep-sea sponge | Deep sea | 30-2000 | Kosterfjord National Park, Sweden, West of Yttre Vattenholmen (58.876233, 11.101483) | 519541 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| Geodia_barretti_n_2022_12 | 144.8Mb | Scaffold | 2024 | CASHTH01 | pharmaceutical biosciences, uppsala university | PRJEB58046 | 71.50% | 31,884 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Whole genome sequence of the deep-sea sponge Geodia barretti (Metazoa, Porifera, Demospongiae) | G3 (Bethesda) | 37619978 |
| Gene ID | Description |
|---|---|
| CAI8058071.1 | |
| CAI8058077.1 | GUANINE NUCLEOTIDE EXCHANGE FACTOR |
| CAI8058076.1 | GUANINE NUCLEOTIDE EXCHANGE FACTOR |
| CAI8058075.1 | GUANINE NUCLEOTIDE EXCHANGE FACTOR |
| CAI8058073.1 | GUANINE NUCLEOTIDE EXCHANGE FACTOR |
| CAI8058072.1 | GUANINE NUCLEOTIDE EXCHANGE FACTOR |
| CAI8058078.1 | GUANINE NUCLEOTIDE EXCHANGE FACTOR |
| CAI8058074.1 | GUANINE NUCLEOTIDE EXCHANGE FACTOR |
| CAI8058079.1 | GUANINE NUCLEOTIDE EXCHANGE FACTOR |
| CAI8058080.1 | GUANINE NUCLEOTIDE EXCHANGE FACTOR |
| CAI8058081.1 | |
| CAI8058082.1 | |
| CAI8058083.1 | |
| CAI8058084.1 | |
| CAI8058085.1 | |
| CAI8058086.1 | |
| CAI8058089.1 | CLASS II AMINOTRANSFERASE/8-AMINO-7-OXONONANOATE SYNTHASE |
| CAI8058090.1 | CLASS II AMINOTRANSFERASE/8-AMINO-7-OXONONANOATE SYNTHASE |
| CAI8058091.1 | CLASS II AMINOTRANSFERASE/8-AMINO-7-OXONONANOATE SYNTHASE |
| CAI8058088.1 | CLASS II AMINOTRANSFERASE/8-AMINO-7-OXONONANOATE SYNTHASE |
| CAI8058087.1 | CLASS II AMINOTRANSFERASE/8-AMINO-7-OXONONANOATE SYNTHASE |
| CAI8058092.1 | |
| CAI8058094.1 | |
| CAI8058093.1 | |
| CAI8058097.1 | SYNTAXIN-18 |
| CAI8058096.1 | SYNTAXIN-18 |
| CAI8058095.1 | SYNTAXIN-18 |
| CAI8058098.1 | SYNTAXIN-18 |
| CAI8058099.1 | SYNTAXIN-18 |
| CAI8058101.1 | JANUS-A/JANUS-B |
| CAI8058100.1 | JANUS-A/JANUS-B |
| CAI8058103.1 | GUANYLATE BINDING PROTEIN |
| CAI8058102.1 | GUANYLATE BINDING PROTEIN |
| CAI8058104.1 | |
| CAI8058105.1 | |
| CAI8058106.1 | |
| CAI8058107.1 | |
| CAI8058108.1 | |
| CAI8058110.1 | WD REPEAT DOMAIN-CONTAINING FAMILY |
| CAI8058109.1 | WD REPEAT DOMAIN-CONTAINING FAMILY |
| CAI8058116.1 | PROTEIN SON |
| CAI8058114.1 | PROTEIN SON |
| CAI8058113.1 | PROTEIN SON |
| CAI8058112.1 | PROTEIN SON |
| CAI8058115.1 | |
| CAI8058118.1 | |
| CAI8058117.1 | |
| CAI8058111.1 | GEO13458P1 |
| CAI8058121.1 | PA-PL1 PHOSPHOLIPASE FAMILY |
| CAI8058120.1 | PA-PL1 PHOSPHOLIPASE FAMILY |
