Geodia barretti is a species of deep-sea sponge in the family Geodiidae, commonly found in cold-water ecosystems of the North Atlantic Ocean. This species thrives in nutrient-rich, cold-water environments and plays a crucial role in deep-sea ecosystems by filtering large volumes of water, contributing to nutrient cycling, and providing habitat for various marine organisms. Its unique adaptations to cold and high-pressure conditions make it an important subject for studying deep-sea biodiversity and ecological processes.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Geodia barretti | Porifera | deep-sea sponge | Deep sea | 30-2000 | Kosterfjord National Park, Sweden, West of Yttre Vattenholmen (58.876233, 11.101483) | 519541 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| Geodia_barretti_n_2022_12 | 144.8Mb | Scaffold | 2024 | CASHTH01 | pharmaceutical biosciences, uppsala university | PRJEB58046 | 71.50% | 31,884 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Whole genome sequence of the deep-sea sponge Geodia barretti (Metazoa, Porifera, Demospongiae) | G3 (Bethesda) | 37619978 |
| Gene ID | Description |
|---|---|
| CAI8058221.1 | OS05G0565100 PROTEIN |
| CAI8058222.1 | |
| CAI8058223.1 | G PROTEIN-COUPLED RECEPTOR KINASE/RIBOSOMAL PROTEIN S6 KINASE |
| CAI8058224.1 | LEUCINE ZIPPER-EF-HAND CONTAINING TRANSMEMBRANE PROTEIN |
| CAI8058225.1 | LEUCINE ZIPPER-EF-HAND CONTAINING TRANSMEMBRANE PROTEIN |
| CAI8058226.1 | LEUCINE ZIPPER-EF-HAND CONTAINING TRANSMEMBRANE PROTEIN |
| CAI8058227.1 | |
| CAI8058228.1 | |
| CAI8058229.1 | CHARGED MULTIVESICULAR BODY PROTEIN |
| CAI8058230.1 | CHARGED MULTIVESICULAR BODY PROTEIN |
| CAI8058232.1 | PROTEIN SIDEKICK |
| CAI8058231.1 | TESMIN/TSO1-RELATED |
| CAI8058235.1 | WD-REPEATCONTAINING PROTEIN WDR1 |
| CAI8058234.1 | WD-REPEATCONTAINING PROTEIN WDR1 |
| CAI8058233.1 | WD-REPEATCONTAINING PROTEIN WDR1 |
| CAI8058236.1 | WD-REPEATCONTAINING PROTEIN WDR1 |
| CAI8058237.1 | WD-REPEATCONTAINING PROTEIN WDR1 |
| CAI8058238.1 | WD-REPEATCONTAINING PROTEIN WDR1 |
| CAI8058239.1 | |
| CAI8058245.1 | PAXILLIN-RELATED |
| CAI8058243.1 | PAXILLIN-RELATED |
| CAI8058244.1 | PAXILLIN-RELATED |
| CAI8058241.1 | NUCLEAR PORE COMPLEX PROTEIN NUP |
| CAI8058246.1 | PAXILLIN-RELATED |
| CAI8058242.1 | PAXILLIN-RELATED |
| CAI8058248.1 | PAXILLIN-RELATED |
| CAI8058240.1 | PAXILLIN-RELATED |
| CAI8058247.1 | PAXILLIN-RELATED |
| CAI8058249.1 | NUCLEAR PORE COMPLEX PROTEIN NUP |
| CAI8058250.1 | |
| CAI8058251.1 | NUCLEAR PORE COMPLEX PROTEIN NUP |
| CAI8058258.1 | ARM REPEAT SUPERFAMILY PROTEIN |
| CAI8058260.1 | ARM REPEAT SUPERFAMILY PROTEIN |
| CAI8058256.1 | ARM REPEAT SUPERFAMILY PROTEIN |
| CAI8058259.1 | ARM REPEAT SUPERFAMILY PROTEIN |
| CAI8058255.1 | ARM REPEAT SUPERFAMILY PROTEIN |
| CAI8058257.1 | ARM REPEAT SUPERFAMILY PROTEIN |
| CAI8058254.1 | ARM REPEAT SUPERFAMILY PROTEIN |
| CAI8058253.1 | ARM REPEAT SUPERFAMILY PROTEIN |
| CAI8058252.1 | ARM REPEAT SUPERFAMILY PROTEIN |
| CAI8058262.1 | ARM REPEAT SUPERFAMILY PROTEIN |
| CAI8058261.1 | ARM REPEAT SUPERFAMILY PROTEIN |
| CAI8058263.1 | MAINTENANCE OF KILLER 16 MAK16 PROTEIN-RELATED |
| CAI8058264.1 | MAINTENANCE OF KILLER 16 MAK16 PROTEIN-RELATED |
| CAI8058265.1 | MAINTENANCE OF KILLER 16 MAK16 PROTEIN-RELATED |
| CAI8058266.1 | |
| CAI8058269.1 | PA-PL1 PHOSPHOLIPASE FAMILY |
| CAI8058268.1 | |
| CAI8058267.1 | |
| CAI8058270.1 |
