Geodia barretti is a species of deep-sea sponge in the family Geodiidae, commonly found in cold-water ecosystems of the North Atlantic Ocean. This species thrives in nutrient-rich, cold-water environments and plays a crucial role in deep-sea ecosystems by filtering large volumes of water, contributing to nutrient cycling, and providing habitat for various marine organisms. Its unique adaptations to cold and high-pressure conditions make it an important subject for studying deep-sea biodiversity and ecological processes.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Geodia barretti | Porifera | deep-sea sponge | Deep sea | 30-2000 | Kosterfjord National Park, Sweden, West of Yttre Vattenholmen (58.876233, 11.101483) | 519541 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| Geodia_barretti_n_2022_12 | 144.8Mb | Scaffold | 2024 | CASHTH01 | pharmaceutical biosciences, uppsala university | PRJEB58046 | 71.50% | 31,884 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Whole genome sequence of the deep-sea sponge Geodia barretti (Metazoa, Porifera, Demospongiae) | G3 (Bethesda) | 37619978 |
| Gene ID | Description |
|---|---|
| CAI8057721.1 | TNF RECEPTOR ASSOCIATED FACTOR |
| CAI8057723.1 | TNF RECEPTOR ASSOCIATED FACTOR |
| CAI8057722.1 | TNF RECEPTOR ASSOCIATED FACTOR |
| CAI8057724.1 | TNF RECEPTOR ASSOCIATED FACTOR |
| CAI8057725.1 | NEPHRIN |
| CAI8057726.1 | |
| CAI8057728.1 | |
| CAI8057727.1 | |
| CAI8057729.1 | TNF RECEPTOR ASSOCIATED FACTOR |
| CAI8057731.1 | TNF RECEPTOR ASSOCIATED FACTOR |
| CAI8057730.1 | TNF RECEPTOR ASSOCIATED FACTOR |
| CAI8057732.1 | |
| CAI8057733.1 | |
| CAI8057734.1 | SERINE-THREONINE PROTEIN KINASE |
| CAI8057736.1 | SRCR DOMAIN-CONTAINING PROTEIN |
| CAI8057735.1 | |
| CAI8057737.1 | SRCR DOMAIN-CONTAINING PROTEIN |
| CAI8057738.1 | SRCR DOMAIN-CONTAINING PROTEIN |
| CAI8057739.1 | TYROSINE-PROTEIN KINASE RECEPTOR |
| CAI8057740.1 | |
| CAI8057741.1 | |
| CAI8057742.1 | - |
| CAI8057743.1 | - |
| CAI8057744.1 | |
| CAI8057745.1 | |
| CAI8057746.1 | COMPLEMENT COMPONENT-RELATED SUSHI DOMAIN-CONTAINING |
| CAI8057749.1 | 26S PROTEASOME REGULATORY SUBUNIT |
| CAI8057748.1 | 26S PROTEASOME REGULATORY SUBUNIT |
| CAI8057747.1 | 26S PROTEASOME REGULATORY SUBUNIT |
| CAI8057750.1 | 26S PROTEASOME REGULATORY SUBUNIT |
| CAI8057751.1 | 26S PROTEASOME REGULATORY SUBUNIT |
| CAI8057753.1 | SODIUM-GLUCOSE COTRANSPORTER REGULATORY PROTEIN -RELATED |
| CAI8057752.1 | SODIUM-GLUCOSE COTRANSPORTER REGULATORY PROTEIN -RELATED |
| CAI8057754.1 | |
| CAI8057756.1 | |
| CAI8057755.1 | |
| CAI8057757.1 | |
| CAI8057758.1 | |
| CAI8057759.1 | |
| CAI8057760.1 | |
| CAI8057761.1 | |
| CAI8057762.1 | VITELLOGENIN RECEPTOR-LIKE PROTEIN-RELATED-RELATED |
| CAI8057764.1 | |
| CAI8057763.1 | |
| CAI8057766.1 | VITELLOGENIN RECEPTOR-LIKE PROTEIN-RELATED-RELATED |
| CAI8057765.1 | VITELLOGENIN RECEPTOR-LIKE PROTEIN-RELATED-RELATED |
| CAI8057768.1 | SOLUTE CARRIER FAMILY 17 |
| CAI8057767.1 | |
| CAI8057770.1 | SOLUTE CARRIER FAMILY 17 |
| CAI8057769.1 | SOLUTE CARRIER FAMILY 17 |
