Geodia barretti is a species of deep-sea sponge in the family Geodiidae, commonly found in cold-water ecosystems of the North Atlantic Ocean. This species thrives in nutrient-rich, cold-water environments and plays a crucial role in deep-sea ecosystems by filtering large volumes of water, contributing to nutrient cycling, and providing habitat for various marine organisms. Its unique adaptations to cold and high-pressure conditions make it an important subject for studying deep-sea biodiversity and ecological processes.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Geodia barretti | Porifera | deep-sea sponge | Deep sea | 30-2000 | Kosterfjord National Park, Sweden, West of Yttre Vattenholmen (58.876233, 11.101483) | 519541 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| Geodia_barretti_n_2022_12 | 144.8Mb | Scaffold | 2024 | CASHTH01 | pharmaceutical biosciences, uppsala university | PRJEB58046 | 71.50% | 31,884 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Whole genome sequence of the deep-sea sponge Geodia barretti (Metazoa, Porifera, Demospongiae) | G3 (Bethesda) | 37619978 |
| Gene ID | Description |
|---|---|
| CAI8057671.1 | |
| CAI8057673.1 | ADHESION G-PROTEIN COUPLED RECEPTOR |
| CAI8057672.1 | ADHESION G-PROTEIN COUPLED RECEPTOR |
| CAI8057674.1 | ADHESION G-PROTEIN COUPLED RECEPTOR |
| CAI8057676.1 | ADHESION G-PROTEIN COUPLED RECEPTOR |
| CAI8057675.1 | ADHESION G-PROTEIN COUPLED RECEPTOR |
| CAI8057677.1 | ADHESION G-PROTEIN COUPLED RECEPTOR |
| CAI8057678.1 | |
| CAI8057679.1 | ADHESION G-PROTEIN COUPLED RECEPTOR |
| CAI8057683.1 | ADHESION G-PROTEIN COUPLED RECEPTOR |
| CAI8057684.1 | ADHESION G-PROTEIN COUPLED RECEPTOR |
| CAI8057685.1 | |
| CAI8057682.1 | ADHESION G-PROTEIN COUPLED RECEPTOR |
| CAI8057681.1 | ADHESION G-PROTEIN COUPLED RECEPTOR |
| CAI8057680.1 | ADHESION G-PROTEIN COUPLED RECEPTOR |
| CAI8057686.1 | ADHESION G-PROTEIN COUPLED RECEPTOR |
| CAI8057687.1 | ADHESION G-PROTEIN COUPLED RECEPTOR |
| CAI8057688.1 | ADHESION G PROTEIN-COUPLED RECEPTOR G7 |
| CAI8057689.1 | |
| CAI8057691.1 | |
| CAI8057690.1 | |
| CAI8057692.1 | |
| CAI8057693.1 | |
| CAI8057694.1 | |
| CAI8057696.1 | EPH RECEPTOR A5 |
| CAI8057695.1 | |
| CAI8057697.1 | |
| CAI8057698.1 | |
| CAI8057699.1 | |
| CAI8057700.1 | ADHESION G-PROTEIN COUPLED RECEPTOR |
| CAI8057701.1 | |
| CAI8057702.1 | ADHESION G-PROTEIN COUPLED RECEPTOR |
| CAI8057703.1 | ADHESION G-PROTEIN COUPLED RECEPTOR |
| CAI8057704.1 | |
| CAI8057706.1 | ADHESION G-PROTEIN COUPLED RECEPTOR |
| CAI8057705.1 | ADHESION G-PROTEIN COUPLED RECEPTOR |
| CAI8057707.1 | ADHESION G-PROTEIN COUPLED RECEPTOR |
| CAI8057708.1 | |
| CAI8057709.1 | |
| CAI8057710.1 | |
| CAI8057711.1 | |
| CAI8057713.1 | MUCIN 4-RELATED |
| CAI8057712.1 | MUCIN 4-RELATED |
| CAI8057714.1 | SRCR DOMAIN-CONTAINING PROTEIN |
| CAI8057715.1 | |
| CAI8057717.1 | MUCIN 4-RELATED |
| CAI8057716.1 | MUCIN 4-RELATED |
| CAI8057718.1 | TYROSINE-PROTEIN KINASE RECEPTOR |
| CAI8057719.1 | TYROSINE-PROTEIN KINASE RECEPTOR |
| CAI8057720.1 | TNF RECEPTOR ASSOCIATED FACTOR |
