Geodia barretti is a species of deep-sea sponge in the family Geodiidae, commonly found in cold-water ecosystems of the North Atlantic Ocean. This species thrives in nutrient-rich, cold-water environments and plays a crucial role in deep-sea ecosystems by filtering large volumes of water, contributing to nutrient cycling, and providing habitat for various marine organisms. Its unique adaptations to cold and high-pressure conditions make it an important subject for studying deep-sea biodiversity and ecological processes.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Geodia barretti | Porifera | deep-sea sponge | Deep sea | 30-2000 | Kosterfjord National Park, Sweden, West of Yttre Vattenholmen (58.876233, 11.101483) | 519541 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| Geodia_barretti_n_2022_12 | 144.8Mb | Scaffold | 2024 | CASHTH01 | pharmaceutical biosciences, uppsala university | PRJEB58046 | 71.50% | 31,884 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Whole genome sequence of the deep-sea sponge Geodia barretti (Metazoa, Porifera, Demospongiae) | G3 (Bethesda) | 37619978 |
| Gene ID | Description |
|---|---|
| CAI8057270.1 | |
| CAI8057272.1 | |
| CAI8057273.1 | |
| CAI8057274.1 | |
| CAI8057275.1 | MUCOLIPIN |
| CAI8057276.1 | |
| CAI8057277.1 | ANKYRIN REPEAT DOMAIN-CONTAINING PROTEIN 39-RELATED |
| CAI8057278.1 | |
| CAI8057279.1 | |
| CAI8057280.1 | |
| CAI8057281.1 | GLYCOPROTEIN HORMONE RECEPTOR |
| CAI8057282.1 | ANTIGEN BSP, PUTATIVE-RELATED |
| CAI8057283.1 | TRANSFORMING GROWTH FACTOR-BETA RECEPTOR TYPE I AND II |
| CAI8057284.1 | PAIRED BOX PROTEIN PAX-6-RELATED-RELATED |
| CAI8057285.1 | |
| CAI8057287.1 | |
| CAI8057286.1 | |
| CAI8057288.1 | |
| CAI8057291.1 | UNCHARACTERIZED DUF1308 |
| CAI8057290.1 | UNCHARACTERIZED DUF1308 |
| CAI8057289.1 | UNCHARACTERIZED DUF1308 |
| CAI8057292.1 | |
| CAI8057293.1 | |
| CAI8057294.1 | |
| CAI8057295.1 | WD REPEAT DOMAIN-RELATED |
| CAI8057296.1 | WD REPEAT DOMAIN-RELATED |
| CAI8057298.1 | WD REPEAT DOMAIN-RELATED |
| CAI8057297.1 | |
| CAI8057302.1 | TRANSMEMBRANE PROTEIN KIAA1109 |
| CAI8057301.1 | TRANSMEMBRANE PROTEIN KIAA1109 |
| CAI8057300.1 | TRANSMEMBRANE PROTEIN KIAA1109 |
| CAI8057299.1 | |
| CAI8057303.1 | TRANSMEMBRANE PROTEIN KIAA1109 |
| CAI8057304.1 | RIBOSOMAL PROTEIN L19 |
| CAI8057305.1 | |
| CAI8057310.1 | TYROSINE-PROTEIN KINASE RECEPTOR |
| CAI8057307.1 | TYROSINE-PROTEIN KINASE RECEPTOR |
| CAI8057306.1 | TYROSINE-PROTEIN KINASE RECEPTOR |
| CAI8057308.1 | TYROSINE-PROTEIN KINASE RECEPTOR |
| CAI8057309.1 | TYROSINE-PROTEIN KINASE RECEPTOR |
| CAI8057311.1 | |
| CAI8057312.1 | |
| CAI8057315.1 | |
| CAI8057314.1 | |
| CAI8057313.1 | |
| CAI8057316.1 | |
| CAI8057317.1 | |
| CAI8057318.1 | |
| CAI8057319.1 | |
| CAI8057322.1 | ZINC FINGER RNA-BINDING PROTEIN |
