Geodia barretti is a species of deep-sea sponge in the family Geodiidae, commonly found in cold-water ecosystems of the North Atlantic Ocean. This species thrives in nutrient-rich, cold-water environments and plays a crucial role in deep-sea ecosystems by filtering large volumes of water, contributing to nutrient cycling, and providing habitat for various marine organisms. Its unique adaptations to cold and high-pressure conditions make it an important subject for studying deep-sea biodiversity and ecological processes.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Geodia barretti | Porifera | deep-sea sponge | Deep sea | 30-2000 | Kosterfjord National Park, Sweden, West of Yttre Vattenholmen (58.876233, 11.101483) | 519541 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| Geodia_barretti_n_2022_12 | 144.8Mb | Scaffold | 2024 | CASHTH01 | pharmaceutical biosciences, uppsala university | PRJEB58046 | 71.50% | 31,884 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Whole genome sequence of the deep-sea sponge Geodia barretti (Metazoa, Porifera, Demospongiae) | G3 (Bethesda) | 37619978 |
| Gene ID | Description |
|---|---|
| CAI8057025.1 | OXIDASE/PEROXIDASE |
| CAI8057026.1 | OXIDASE/PEROXIDASE |
| CAI8057023.1 | OXIDASE/PEROXIDASE |
| CAI8057024.1 | OXIDASE/PEROXIDASE |
| CAI8057022.1 | OXIDASE/PEROXIDASE |
| CAI8057021.1 | SYNAPTIC ADHESION-LIKE MOLECULE SALM |
| CAI8057027.1 | OXIDASE/PEROXIDASE |
| CAI8057029.1 | OXIDASE/PEROXIDASE |
| CAI8057028.1 | OXIDASE/PEROXIDASE |
| CAI8057030.1 | LYR MOTIF-CONTAINING PROTEIN 2 |
| CAI8057032.1 | PARKIN COREGULATED GENE PROTEIN PARK2 COREGULATED |
| CAI8057031.1 | PARKIN COREGULATED GENE PROTEIN PARK2 COREGULATED |
| CAI8057033.1 | PARKIN COREGULATED GENE PROTEIN PARK2 COREGULATED |
| CAI8057034.1 | SAP18 |
| CAI8057035.1 | SAP18 |
| CAI8057036.1 | SAP18 |
| CAI8057037.1 | |
| CAI8057039.1 | |
| CAI8057038.1 | |
| CAI8057040.1 | |
| CAI8057041.1 | |
| CAI8057042.1 | SH3 DOMAIN-CONTAINING |
| CAI8057043.1 | IGGFC_BINDING DOMAIN-CONTAINING PROTEIN |
| CAI8057044.1 | |
| CAI8057045.1 | IGGFC_BINDING DOMAIN-CONTAINING PROTEIN |
| CAI8057046.1 | |
| CAI8057047.1 | LIPIN |
| CAI8057050.1 | ABHYDROLASE DOMAIN-CONTAINING PROTEIN |
| CAI8057049.1 | ABHYDROLASE DOMAIN-CONTAINING PROTEIN |
| CAI8057048.1 | ABHYDROLASE DOMAIN-CONTAINING PROTEIN |
| CAI8057051.1 | ABHYDROLASE DOMAIN-CONTAINING PROTEIN |
| CAI8057052.1 | ABHYDROLASE DOMAIN-CONTAINING PROTEIN |
| CAI8057053.1 | RNA-BINDING PROTEIN RELATED |
| CAI8057054.1 | |
| CAI8057055.1 | |
| CAI8057056.1 | ASPARTYL/LYSYL-TRNA SYNTHETASE |
| CAI8057057.1 | |
| CAI8057058.1 | |
| CAI8057059.1 | |
| CAI8057060.1 | G PROTEIN-COUPLED RECEPTOR-RELATED |
| CAI8057061.1 | |
| CAI8057062.1 | |
| CAI8057065.1 | |
| CAI8057064.1 | |
| CAI8057063.1 | |
| CAI8057066.1 | |
| CAI8057067.1 | RING-TYPE DOMAIN-CONTAINING PROTEIN |
| CAI8057068.1 | |
| CAI8057069.1 | |
| CAI8057070.1 | INNER MEMBRANE PEPTIDE TRANSPORTER |
