About Geodia barretti

Geodia barretti is a species of deep-sea sponge in the family Geodiidae, commonly found in cold-water ecosystems of the North Atlantic Ocean. This species thrives in nutrient-rich, cold-water environments and plays a crucial role in deep-sea ecosystems by filtering large volumes of water, contributing to nutrient cycling, and providing habitat for various marine organisms. Its unique adaptations to cold and high-pressure conditions make it an important subject for studying deep-sea biodiversity and ecological processes.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Geodia barrettiPoriferadeep-sea spongeDeep sea30-2000Kosterfjord National Park, Sweden, West of Yttre Vattenholmen (58.876233, 11.101483)519541

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Geodia_barretti_n_2022_12144.8MbScaffold2024CASHTH01pharmaceutical biosciences, uppsala universityPRJEB5804671.50%31,884

References
TitleJournalPubmed ID
Whole genome sequence of the deep-sea sponge Geodia barretti (Metazoa, Porifera, Demospongiae)G3 (Bethesda)37619978

Gene Information

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Gene IDDescription
CAI8057071.1INNER MEMBRANE PEPTIDE TRANSPORTER
CAI8057072.1THIOESTERASE 1/PROTEASE 1/LYSOPHOSPHOLIPASE L1
CAI8057073.1IMPORT ATP-BINDING PROTEIN
CAI8057074.1FLAVOPROTEIN OXYGENASE
CAI8057075.1GLUTAREDOXIN
CAI8057076.1TREHALOSE-6-PHOSPHATE SYNTHASE
CAI8057077.1TREHALOSE 6-PHOSPHATE PHOSPHATASE
CAI8057078.1N-ACYLNEURAMINATE-9-PHOSPHATASE
CAI8057079.1GLUTATHIONE S-TRANSFERASE KAPPA
CAI8057080.1NADH-QUINONE OXIDOREDUCTASE, E SUBUNIT
CAI8057081.1NADH-QUINONE OXIDOREDUCTASE SUBUNIT F
CAI8057082.1DNA MISMATCH REPAIR PROTEIN MUTS FAMILY MEMBER
CAI8057083.1DNA MISMATCH REPAIR PROTEIN MUTS FAMILY MEMBER
CAI8057084.1
CAI8057085.1DNA MISMATCH REPAIR PROTEIN MLH, PMS, MUTL
CAI8057086.1
CAI8057087.1PREPHENATE DEHYDRATASE P PROTEIN
CAI8057088.1LEUCYL-TRNA SYNTHETASE
CAI8057089.1COBALT-PRECORRIN-8 METHYLMUTASE
CAI8057090.1COBALT-PRECORRIN-5B C(1)-METHYLTRANSFERASE
CAI8057091.1COBALT-PRECORRIN-6B C(15)-METHYLTRANSFERASE (DECARBOXYLATING)
CAI8057092.1COBALT-PRECORRIN-2 C(20)-METHYLTRANSFERASE
CAI8057093.1SIROHEME SYNTHASE-RELATED
CAI8057094.1COBALT-PRECORRIN-5A HYDROLASE
CAI8057095.1COBALT-FACTOR III C(17)-METHYLTRANSFERASE-RELATED
CAI8057103.1CARBAMOYLTRANSFERASE FAMILY MEMBER
CAI8057101.1CARBAMOYLTRANSFERASE FAMILY MEMBER
CAI8057100.1CARBAMOYLTRANSFERASE FAMILY MEMBER
CAI8057102.1CARBAMOYLTRANSFERASE FAMILY MEMBER
CAI8057099.1CARBAMOYLTRANSFERASE FAMILY MEMBER
CAI8057098.1CARBAMOYLTRANSFERASE FAMILY MEMBER
CAI8057097.1CARBAMOYLTRANSFERASE FAMILY MEMBER
CAI8057096.1CARBAMOYLTRANSFERASE FAMILY MEMBER
CAI8057108.1ORNITHINE CARBAMOYLTRANSFERASE, MITOCHONDRIAL
CAI8057105.1ORNITHINE CARBAMOYLTRANSFERASE, MITOCHONDRIAL
CAI8057109.1ORNITHINE CARBAMOYLTRANSFERASE, MITOCHONDRIAL
CAI8057106.1ORNITHINE CARBAMOYLTRANSFERASE, MITOCHONDRIAL
CAI8057107.1ORNITHINE CARBAMOYLTRANSFERASE, MITOCHONDRIAL
CAI8057104.1ORNITHINE CARBAMOYLTRANSFERASE, MITOCHONDRIAL
CAI8057111.1BIFUNCTIONAL PROTEIN PYRR
CAI8057110.1BIFUNCTIONAL PROTEIN PYRR
CAI8057112.1
CAI8057113.1PHOSPHOENOLPYRUVATE CARBOXYLASE
CAI8057114.13-OXOACYL-(ACYL-CARRIER-PROTEIN) REDUCTASE
CAI8057115.1FATTY ACID/PHOSPHOLIPID SYNTHESIS PROTEIN PLSX
CAI8057116.1L-2-HYDROXYGLUTARATE DEHYDROGENASE, MITOCHONDRIAL
CAI8057117.1AMINOBENZOATE/ANTHRANILATE SYNTHASE
CAI8057118.1MULTIFUNCTIONAL TRYPTOPHAN BIOSYNTHESIS PROTEIN-RELATED
CAI8057119.1MULTIFUNCTIONAL TRYPTOPHAN BIOSYNTHESIS PROTEIN-RELATED
CAI8057120.1
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