Geodia barretti is a species of deep-sea sponge in the family Geodiidae, commonly found in cold-water ecosystems of the North Atlantic Ocean. This species thrives in nutrient-rich, cold-water environments and plays a crucial role in deep-sea ecosystems by filtering large volumes of water, contributing to nutrient cycling, and providing habitat for various marine organisms. Its unique adaptations to cold and high-pressure conditions make it an important subject for studying deep-sea biodiversity and ecological processes.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Geodia barretti | Porifera | deep-sea sponge | Deep sea | 30-2000 | Kosterfjord National Park, Sweden, West of Yttre Vattenholmen (58.876233, 11.101483) | 519541 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| Geodia_barretti_n_2022_12 | 144.8Mb | Scaffold | 2024 | CASHTH01 | pharmaceutical biosciences, uppsala university | PRJEB58046 | 71.50% | 31,884 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Whole genome sequence of the deep-sea sponge Geodia barretti (Metazoa, Porifera, Demospongiae) | G3 (Bethesda) | 37619978 |
| Gene ID | Description |
|---|---|
| CAI8056968.1 | UBIQUITIN CARBOXYL-TERMINAL HYDROLASE |
| CAI8056967.1 | |
| CAI8056975.1 | ANKYRIN REPEAT DOMAIN-CONTAINING PROTEIN 13 |
| CAI8056974.1 | ANKYRIN REPEAT DOMAIN-CONTAINING PROTEIN 13 |
| CAI8056973.1 | ANKYRIN REPEAT DOMAIN-CONTAINING PROTEIN 13 |
| CAI8056976.1 | ANKYRIN REPEAT DOMAIN-CONTAINING PROTEIN 13 |
| CAI8056978.1 | |
| CAI8056979.1 | |
| CAI8056977.1 | |
| CAI8056980.1 | ARGININE-TRNA-PROTEIN TRANSFERASE 1 |
| CAI8056981.1 | SULFATASE MODIFYING FACTOR 1, 2 |
| CAI8056982.1 | G PROTEIN-COUPLED RECEPTOR 157-RELATED |
| CAI8056983.1 | G PROTEIN-COUPLED RECEPTOR 157-RELATED |
| CAI8056984.1 | |
| CAI8056985.1 | METHYLENETETRAHYDROFOLATE REDUCTASE |
| CAI8056988.1 | METHYLENETETRAHYDROFOLATE REDUCTASE |
| CAI8056987.1 | METHYLENETETRAHYDROFOLATE REDUCTASE |
| CAI8056986.1 | METHYLENETETRAHYDROFOLATE REDUCTASE |
| CAI8056989.1 | |
| CAI8056993.1 | |
| CAI8056990.1 | |
| CAI8056991.1 | DELTEX-RELATED |
| CAI8056992.1 | |
| CAI8056994.1 | DELTEX-RELATED |
| CAI8056995.1 | DELTEX-RELATED |
| CAI8056996.1 | TYROSINE-PROTEIN KINASE |
| CAI8056997.1 | BASIGIN RELATED |
| CAI8056999.1 | CARBAMOYLTRANSFERASE FAMILY MEMBER |
| CAI8057000.1 | CARBAMOYLTRANSFERASE FAMILY MEMBER |
| CAI8057001.1 | CARBAMOYLTRANSFERASE FAMILY MEMBER |
| CAI8056998.1 | ORNITHINE CARBAMOYLTRANSFERASE, MITOCHONDRIAL |
| CAI8057002.1 | CARBAMOYLTRANSFERASE FAMILY MEMBER |
| CAI8057003.1 | CARBAMOYLTRANSFERASE FAMILY MEMBER |
| CAI8057004.1 | CARBAMOYLTRANSFERASE FAMILY MEMBER |
| CAI8057006.1 | |
| CAI8057005.1 | |
| CAI8057007.1 | |
| CAI8057008.1 | |
| CAI8057009.1 | |
| CAI8057010.1 | TYROSINE-PROTEIN KINASE |
| CAI8057011.1 | PROTEIN ENHANCER OF SEVENLESS 2B |
| CAI8057012.1 | FI20236P1 |
| CAI8057013.1 | |
| CAI8057015.1 | |
| CAI8057014.1 | |
| CAI8057016.1 | |
| CAI8057017.1 | |
| CAI8057019.1 | OS09G0542200 PROTEIN |
| CAI8057018.1 | OS09G0542200 PROTEIN |
| CAI8057020.1 |
