Geodia barretti is a species of deep-sea sponge in the family Geodiidae, commonly found in cold-water ecosystems of the North Atlantic Ocean. This species thrives in nutrient-rich, cold-water environments and plays a crucial role in deep-sea ecosystems by filtering large volumes of water, contributing to nutrient cycling, and providing habitat for various marine organisms. Its unique adaptations to cold and high-pressure conditions make it an important subject for studying deep-sea biodiversity and ecological processes.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Geodia barretti | Porifera | deep-sea sponge | Deep sea | 30-2000 | Kosterfjord National Park, Sweden, West of Yttre Vattenholmen (58.876233, 11.101483) | 519541 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| Geodia_barretti_n_2022_12 | 144.8Mb | Scaffold | 2024 | CASHTH01 | pharmaceutical biosciences, uppsala university | PRJEB58046 | 71.50% | 31,884 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Whole genome sequence of the deep-sea sponge Geodia barretti (Metazoa, Porifera, Demospongiae) | G3 (Bethesda) | 37619978 |
| Gene ID | Description |
|---|---|
| CAI8056771.1 | |
| CAI8056772.1 | |
| CAI8056773.1 | |
| CAI8056774.1 | |
| CAI8056775.1 | |
| CAI8056776.1 | |
| CAI8056777.1 | DRAB11-RELATED |
| CAI8056780.1 | WD REPEAT DOMAIN-RELATED |
| CAI8056779.1 | WD REPEAT DOMAIN-RELATED |
| CAI8056778.1 | WD REPEAT DOMAIN-RELATED |
| CAI8056781.1 | WD REPEAT DOMAIN-RELATED |
| CAI8056782.1 | WD REPEAT DOMAIN-RELATED |
| CAI8056783.1 | WD REPEAT DOMAIN-RELATED |
| CAI8056784.1 | WD REPEAT DOMAIN-RELATED |
| CAI8056785.1 | WD REPEAT DOMAIN-RELATED |
| CAI8056786.1 | |
| CAI8056787.1 | SORTILIN RELATED |
| CAI8056788.1 | DNA GYRASE/TOPOISOMERASE SUBUNIT A |
| CAI8056789.1 | DNA GYRASE/TOPOISOMERASE SUBUNIT A |
| CAI8056797.1 | DNA GYRASE/TOPOISOMERASE SUBUNIT B |
| CAI8056796.1 | DNA GYRASE/TOPOISOMERASE SUBUNIT B |
| CAI8056795.1 | DNA GYRASE/TOPOISOMERASE SUBUNIT B |
| CAI8056793.1 | DNA GYRASE/TOPOISOMERASE SUBUNIT B |
| CAI8056794.1 | DNA GYRASE/TOPOISOMERASE SUBUNIT B |
| CAI8056792.1 | DNA GYRASE/TOPOISOMERASE SUBUNIT B |
| CAI8056791.1 | DNA GYRASE/TOPOISOMERASE SUBUNIT B |
| CAI8056790.1 | DNA GYRASE/TOPOISOMERASE SUBUNIT B |
| CAI8056801.1 | DNA GYRASE/TOPOISOMERASE SUBUNIT B |
| CAI8056800.1 | DNA GYRASE/TOPOISOMERASE SUBUNIT B |
| CAI8056799.1 | DNA GYRASE/TOPOISOMERASE SUBUNIT B |
| CAI8056798.1 | DNA GYRASE/TOPOISOMERASE SUBUNIT B |
| CAI8056802.1 | CHROMOSOMAL REPLICATION INITIATOR PROTEIN DNAA |
| CAI8056803.1 | 4-HYDROXY-3-METHYLBUT-2-ENYL DIPHOSPHATE REDUCTASE, CHLOROPLASTIC |
| CAI8056804.1 | DNA-INVERTASE FROM LAMBDOID PROPHAGE |
| CAI8056805.1 | TYPE-5 URACIL-DNA GLYCOSYLASE |
| CAI8056806.1 | TYPE-5 URACIL-DNA GLYCOSYLASE |
| CAI8056807.1 | PEPTIDASE T |
| CAI8056808.1 | 2-KETO-3-DEOXY-L-RHAMNONATE ALDOLASE |
| CAI8056809.1 | SUA5 |
| CAI8056810.1 | GERANYLGERANYL PYROPHOSPHATE SYNTHASE |
| CAI8056811.1 | PHOSPHOGLYCERATE KINASE |
| CAI8056812.1 | PHOSPHOGLYCERATE KINASE |
| CAI8056814.1 | PHOSPHOGLYCERATE KINASE |
| CAI8056813.1 | PHOSPHOGLYCERATE KINASE |
| CAI8056815.1 | PHOSPHOGLYCERATE KINASE |
| CAI8056816.1 | PHOSPHOGLYCERATE KINASE |
| CAI8056817.1 | PHOSPHOGLYCERATE KINASE |
| CAI8056819.1 | PHOSPHOGLYCERATE KINASE |
| CAI8056818.1 | PHOSPHOGLYCERATE KINASE |
| CAI8056821.1 | PHOSPHOGLYCERATE KINASE |
