Geodia barretti is a species of deep-sea sponge in the family Geodiidae, commonly found in cold-water ecosystems of the North Atlantic Ocean. This species thrives in nutrient-rich, cold-water environments and plays a crucial role in deep-sea ecosystems by filtering large volumes of water, contributing to nutrient cycling, and providing habitat for various marine organisms. Its unique adaptations to cold and high-pressure conditions make it an important subject for studying deep-sea biodiversity and ecological processes.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Geodia barretti | Porifera | deep-sea sponge | Deep sea | 30-2000 | Kosterfjord National Park, Sweden, West of Yttre Vattenholmen (58.876233, 11.101483) | 519541 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| Geodia_barretti_n_2022_12 | 144.8Mb | Scaffold | 2024 | CASHTH01 | pharmaceutical biosciences, uppsala university | PRJEB58046 | 71.50% | 31,884 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Whole genome sequence of the deep-sea sponge Geodia barretti (Metazoa, Porifera, Demospongiae) | G3 (Bethesda) | 37619978 |
| Gene ID | Description |
|---|---|
| CAI8056571.1 | CALCIUM-DEPENDENT SECRETION ACTIVATOR |
| CAI8056572.1 | CALCIUM-DEPENDENT SECRETION ACTIVATOR |
| CAI8056573.1 | CALCIUM-DEPENDENT SECRETION ACTIVATOR |
| CAI8056574.1 | CALCIUM-DEPENDENT SECRETION ACTIVATOR |
| CAI8056575.1 | CALCIUM-DEPENDENT SECRETION ACTIVATOR |
| CAI8056577.1 | |
| CAI8056576.1 | |
| CAI8056578.1 | |
| CAI8056579.1 | EGF-LIKE DOMAIN-CONTAINING PROTEIN |
| CAI8056580.1 | STABILIN |
| CAI8056582.1 | HEAT SHOCK PROTEIN 90 FAMILY MEMBER |
| CAI8056581.1 | HEAT SHOCK PROTEIN 90 FAMILY MEMBER |
| CAI8056583.1 | HEAT SHOCK PROTEIN 90 FAMILY MEMBER |
| CAI8056584.1 | HEAT SHOCK PROTEIN 90 FAMILY MEMBER |
| CAI8056585.1 | HEAT SHOCK PROTEIN 90 FAMILY MEMBER |
| CAI8056586.1 | RING-TYPE DOMAIN-CONTAINING PROTEIN |
| CAI8056589.1 | UNCHARACTERIZED |
| CAI8056588.1 | UNCHARACTERIZED |
| CAI8056587.1 | |
| CAI8056590.1 | UNCHARACTERIZED |
| CAI8056591.1 | ALDEHYDE DEHYDROGENASE-RELATED |
| CAI8056592.1 | |
| CAI8056593.1 | PROTEASOME SUBUNIT ALPHA/BETA |
| CAI8056595.1 | PROTEASOME SUBUNIT ALPHA/BETA |
| CAI8056594.1 | PROTEASOME SUBUNIT ALPHA/BETA |
| CAI8056596.1 | SUCCINATE DEHYDROGENASE 2 FLAVOPROTEIN SUBUNIT |
| CAI8056597.1 | BCDNA.GH03377 |
| CAI8056598.1 | - |
| CAI8056599.1 | TRANSCRIPTION TERMINATION FACTOR RHO |
| CAI8056600.1 | TRANSCRIPTION TERMINATION FACTOR RHO |
| CAI8056601.1 | TRANSCRIPTION TERMINATION FACTOR RHO |
| CAI8056602.1 | TRANSCRIPTION TERMINATION FACTOR RHO |
| CAI8056603.1 | LD18447P |
| CAI8056604.1 | HEMK METHYLTRANSFERASE |
| CAI8056605.1 | RNA POLYMERASE ECF-TYPE SIGMA FACTO |
| CAI8056606.1 | |
| CAI8056607.1 | |
| CAI8056608.1 | |
| CAI8056609.1 | |
| CAI8056610.1 | |
| CAI8056611.1 | SERINE-THREONINE PROTEIN KINASE |
| CAI8056613.1 | |
| CAI8056612.1 | |
| CAI8056614.1 | |
| CAI8056615.1 | |
| CAI8056616.1 | |
| CAI8056617.1 | |
| CAI8056618.1 | |
| CAI8056619.1 | PHOSPHOENOLPYRUVATE DIKINASE-RELATED |
| CAI8056620.1 |
