Geodia barretti is a species of deep-sea sponge in the family Geodiidae, commonly found in cold-water ecosystems of the North Atlantic Ocean. This species thrives in nutrient-rich, cold-water environments and plays a crucial role in deep-sea ecosystems by filtering large volumes of water, contributing to nutrient cycling, and providing habitat for various marine organisms. Its unique adaptations to cold and high-pressure conditions make it an important subject for studying deep-sea biodiversity and ecological processes.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Geodia barretti | Porifera | deep-sea sponge | Deep sea | 30-2000 | Kosterfjord National Park, Sweden, West of Yttre Vattenholmen (58.876233, 11.101483) | 519541 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| Geodia_barretti_n_2022_12 | 144.8Mb | Scaffold | 2024 | CASHTH01 | pharmaceutical biosciences, uppsala university | PRJEB58046 | 71.50% | 31,884 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Whole genome sequence of the deep-sea sponge Geodia barretti (Metazoa, Porifera, Demospongiae) | G3 (Bethesda) | 37619978 |
| Gene ID | Description |
|---|---|
| CAI8056271.1 | |
| CAI8056272.1 | |
| CAI8056273.1 | |
| CAI8056274.1 | DUAL SPECIFICITY PROTEIN PHOSPHATASE |
| CAI8056275.1 | SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED |
| CAI8056276.1 | SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED |
| CAI8056277.1 | |
| CAI8056280.1 | ANTHRAX TOXIN RECEPTOR |
| CAI8056279.1 | ANTHRAX TOXIN RECEPTOR |
| CAI8056278.1 | |
| CAI8056281.1 | ANTHRAX TOXIN RECEPTOR |
| CAI8056282.1 | ANTHRAX TOXIN RECEPTOR |
| CAI8056284.1 | ANTHRAX TOXIN RECEPTOR |
| CAI8056283.1 | ANTHRAX TOXIN RECEPTOR |
| CAI8056288.1 | WD40 REPEAT DOMAIN 95 |
| CAI8056289.1 | WD40 REPEAT DOMAIN 95 |
| CAI8056290.1 | WD40 REPEAT DOMAIN 95 |
| CAI8056291.1 | WD40 REPEAT DOMAIN 95 |
| CAI8056287.1 | WD40 REPEAT DOMAIN 95 |
| CAI8056286.1 | WD40 REPEAT DOMAIN 95 |
| CAI8056285.1 | WD40 REPEAT DOMAIN 95 |
| CAI8056292.1 | WD40 REPEAT DOMAIN 95 |
| CAI8056293.1 | WD40 REPEAT DOMAIN 95 |
| CAI8056294.1 | |
| CAI8056295.1 | |
| CAI8056296.1 | |
| CAI8056297.1 | |
| CAI8056298.1 | |
| CAI8056299.1 | TYROSINE-PROTEIN KINASE RECEPTOR |
| CAI8056303.1 | TYROSINE-PROTEIN KINASE RECEPTOR |
| CAI8056306.1 | TYROSINE-PROTEIN KINASE RECEPTOR |
| CAI8056304.1 | TYROSINE-PROTEIN KINASE RECEPTOR |
| CAI8056302.1 | TYROSINE-PROTEIN KINASE RECEPTOR |
| CAI8056301.1 | TYROSINE-PROTEIN KINASE RECEPTOR |
| CAI8056305.1 | TYROSINE-PROTEIN KINASE RECEPTOR |
| CAI8056300.1 | |
| CAI8056307.1 | TYROSINE-PROTEIN KINASE RECEPTOR |
| CAI8056308.1 | TYROSINE-PROTEIN KINASE RECEPTOR |
| CAI8056309.1 | TYROSINE-PROTEIN KINASE RECEPTOR |
| CAI8056310.1 | TYROSINE-PROTEIN KINASE RECEPTOR |
| CAI8056311.1 | TYROSINE-PROTEIN KINASE RECEPTOR |
| CAI8056312.1 | TYROSINE-PROTEIN KINASE RECEPTOR |
| CAI8056313.1 | |
| CAI8056314.1 | |
| CAI8056315.1 | TRANSPOSON |
| CAI8056316.1 | |
| CAI8056317.1 | |
| CAI8056318.1 | |
| CAI8056319.1 | |
| CAI8056320.1 |
