Geodia barretti is a species of deep-sea sponge in the family Geodiidae, commonly found in cold-water ecosystems of the North Atlantic Ocean. This species thrives in nutrient-rich, cold-water environments and plays a crucial role in deep-sea ecosystems by filtering large volumes of water, contributing to nutrient cycling, and providing habitat for various marine organisms. Its unique adaptations to cold and high-pressure conditions make it an important subject for studying deep-sea biodiversity and ecological processes.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Geodia barretti | Porifera | deep-sea sponge | Deep sea | 30-2000 | Kosterfjord National Park, Sweden, West of Yttre Vattenholmen (58.876233, 11.101483) | 519541 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| Geodia_barretti_n_2022_12 | 144.8Mb | Scaffold | 2024 | CASHTH01 | pharmaceutical biosciences, uppsala university | PRJEB58046 | 71.50% | 31,884 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Whole genome sequence of the deep-sea sponge Geodia barretti (Metazoa, Porifera, Demospongiae) | G3 (Bethesda) | 37619978 |
| Gene ID | Description |
|---|---|
| CAI8056171.1 | XYLOGLUCANASE (EUROFUNG) |
| CAI8056172.1 | HYDRANTOINASE/DIHYDROPYRIMIDINASE FAMILY MEMBER |
| CAI8056176.1 | INNER NUCLEAR MEMBRANE PROTEIN MAN1 LEM DOMAIN CONTAINING PROTEIN |
| CAI8056175.1 | INNER NUCLEAR MEMBRANE PROTEIN MAN1 LEM DOMAIN CONTAINING PROTEIN |
| CAI8056174.1 | INNER NUCLEAR MEMBRANE PROTEIN MAN1 LEM DOMAIN CONTAINING PROTEIN |
| CAI8056173.1 | INNER NUCLEAR MEMBRANE PROTEIN MAN1 LEM DOMAIN CONTAINING PROTEIN |
| CAI8056177.1 | |
| CAI8056178.1 | RNA RECOGNITION MOTIF-CONTAINING |
| CAI8056179.1 | |
| CAI8056182.1 | INOSINE-5-MONOPHOSPHATE DEHYDROGENASE RELATED |
| CAI8056181.1 | INOSINE-5-MONOPHOSPHATE DEHYDROGENASE RELATED |
| CAI8056180.1 | INOSINE-5-MONOPHOSPHATE DEHYDROGENASE RELATED |
| CAI8056183.1 | INOSINE-5-MONOPHOSPHATE DEHYDROGENASE RELATED |
| CAI8056184.1 | INOSINE-5-MONOPHOSPHATE DEHYDROGENASE RELATED |
| CAI8056185.1 | LIM DOMAIN-CONTAINING PROTEIN |
| CAI8056186.1 | LIM DOMAIN-CONTAINING PROTEIN |
| CAI8056187.1 | |
| CAI8056188.1 | |
| CAI8056189.1 | UBIQUITIN |
| CAI8056190.1 | |
| CAI8056191.1 | |
| CAI8056192.1 | |
| CAI8056193.1 | |
| CAI8056194.1 | DUAL SERINE/THREONINE AND TYROSINE PROTEIN KINASE |
| CAI8056196.1 | |
| CAI8056195.1 | MUCIN 4-RELATED |
| CAI8056197.1 | |
| CAI8056198.1 | DUAL SERINE/THREONINE AND TYROSINE PROTEIN KINASE |
| CAI8056200.1 | ANKYRIN REPEAT PROTEIN |
| CAI8056199.1 | ANK_REP_REGION DOMAIN-CONTAINING PROTEIN |
| CAI8056201.1 | ANK_REP_REGION DOMAIN-CONTAINING PROTEIN |
| CAI8056202.1 | ANKYRIN REPEAT DOMAIN-CONTAINING PROTEIN 39-RELATED |
| CAI8056204.1 | |
| CAI8056203.1 | |
| CAI8056205.1 | |
| CAI8056206.1 | D-ALANYL-D-ALANINE CARBOXYPEPTIDASE |
| CAI8056207.1 | D-ALANYL-D-ALANINE CARBOXYPEPTIDASE |
| CAI8056208.1 | D-ALANYL-D-ALANINE CARBOXYPEPTIDASE |
| CAI8056209.1 | U7 SNRNA-ASSOCIATED SM-LIKE PROTEIN LSM10 |
| CAI8056212.1 | NITRIC OXIDE SYNTHASE-RELATED |
| CAI8056211.1 | NITRIC OXIDE SYNTHASE-RELATED |
| CAI8056210.1 | NITRIC OXIDE SYNTHASE-RELATED |
| CAI8056214.1 | JITTERBUG, ISOFORM N |
| CAI8056213.1 | JITTERBUG, ISOFORM N |
| CAI8056215.1 | JITTERBUG, ISOFORM N |
| CAI8056216.1 | METHIONINE--TRNA LIGASE |
| CAI8056217.1 | METHIONINE--TRNA LIGASE |
| CAI8056218.1 | |
| CAI8056219.1 | |
| CAI8056220.1 |
