Geodia barretti is a species of deep-sea sponge in the family Geodiidae, commonly found in cold-water ecosystems of the North Atlantic Ocean. This species thrives in nutrient-rich, cold-water environments and plays a crucial role in deep-sea ecosystems by filtering large volumes of water, contributing to nutrient cycling, and providing habitat for various marine organisms. Its unique adaptations to cold and high-pressure conditions make it an important subject for studying deep-sea biodiversity and ecological processes.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Geodia barretti | Porifera | deep-sea sponge | Deep sea | 30-2000 | Kosterfjord National Park, Sweden, West of Yttre Vattenholmen (58.876233, 11.101483) | 519541 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| Geodia_barretti_n_2022_12 | 144.8Mb | Scaffold | 2024 | CASHTH01 | pharmaceutical biosciences, uppsala university | PRJEB58046 | 71.50% | 31,884 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Whole genome sequence of the deep-sea sponge Geodia barretti (Metazoa, Porifera, Demospongiae) | G3 (Bethesda) | 37619978 |
| Gene ID | Description |
|---|---|
| CAI8055971.1 | BONUS, ISOFORM C-RELATED |
| CAI8055972.1 | |
| CAI8055973.1 | WD40 REPEAT PROTEIN |
| CAI8055975.1 | KINESIN-ASSOCIATED PROTEINS |
| CAI8055974.1 | KINESIN-ASSOCIATED PROTEINS |
| CAI8055976.1 | KINESIN-ASSOCIATED PROTEINS |
| CAI8055977.1 | KINESIN-ASSOCIATED PROTEINS |
| CAI8055978.1 | KINESIN-ASSOCIATED PROTEINS |
| CAI8055981.1 | |
| CAI8055980.1 | |
| CAI8055979.1 | |
| CAI8055982.1 | |
| CAI8055983.1 | DEOXYHYPUSINE SYNTHASE |
| CAI8055984.1 | DEOXYHYPUSINE SYNTHASE |
| CAI8055985.1 | DEOXYHYPUSINE SYNTHASE |
| CAI8055986.1 | TYROSINE-PROTEIN KINASE RECEPTOR |
| CAI8055987.1 | TYROSINE-PROTEIN KINASE RECEPTOR |
| CAI8055988.1 | |
| CAI8055989.1 | VASCULAR CELL ADHESION MOLECULE 1 |
| CAI8055990.1 | |
| CAI8055991.1 | |
| CAI8055992.1 | TYROSINE-PROTEIN KINASE RECEPTOR |
| CAI8055993.1 | |
| CAI8055994.1 | |
| CAI8055995.1 | SERINE PEPTIDASE S9 FAMILY MEMBER |
| CAI8055996.1 | CATECHOL-2,3-DIOXYGENASE |
| CAI8055997.1 | ACETYLORNITHINE DEACETYLASE |
| CAI8055998.1 | OLIGOPEPTIDE TRANSPORT ATP-BINDING PROTEIN APPD |
| CAI8056001.1 | DNA REPAIR/RNA PROCESSING CPSF FAMILY |
| CAI8056000.1 | DNA REPAIR/RNA PROCESSING CPSF FAMILY |
| CAI8055999.1 | DNA REPAIR/RNA PROCESSING CPSF FAMILY |
| CAI8056003.1 | DNA REPAIR/RNA PROCESSING CPSF FAMILY |
| CAI8056002.1 | DNA REPAIR/RNA PROCESSING CPSF FAMILY |
| CAI8056004.1 | DNA REPAIR/RNA PROCESSING CPSF FAMILY |
| CAI8056005.1 | DNA REPAIR/RNA PROCESSING CPSF FAMILY |
| CAI8056006.1 | DNA REPAIR/RNA PROCESSING CPSF FAMILY |
| CAI8056007.1 | PHOSPHATIDYLINOSITOL 3-KINASE REGULATORY SUBUNIT |
| CAI8056008.1 | |
| CAI8056010.1 | IST1 FAMILY MEMBER |
| CAI8056011.1 | IST1 FAMILY MEMBER |
| CAI8056009.1 | IST1 FAMILY MEMBER |
| CAI8056014.1 | GMP REDUCTASE |
| CAI8056012.1 | GMP REDUCTASE |
| CAI8056013.1 | GMP REDUCTASE |
| CAI8056015.1 | RIBOSOME BIOGENESIS PROTEIN NOP10 |
| CAI8056023.1 | LEUCINE-RICH REPEAT, ISOFORM F-RELATED |
| CAI8056020.1 | LEUCINE-RICH REPEAT, ISOFORM F-RELATED |
| CAI8056022.1 | LEUCINE-RICH REPEAT, ISOFORM F-RELATED |
| CAI8056019.1 | LEUCINE-RICH REPEAT, ISOFORM F-RELATED |
| CAI8056018.1 |
