Geodia barretti is a species of deep-sea sponge in the family Geodiidae, commonly found in cold-water ecosystems of the North Atlantic Ocean. This species thrives in nutrient-rich, cold-water environments and plays a crucial role in deep-sea ecosystems by filtering large volumes of water, contributing to nutrient cycling, and providing habitat for various marine organisms. Its unique adaptations to cold and high-pressure conditions make it an important subject for studying deep-sea biodiversity and ecological processes.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Geodia barretti | Porifera | deep-sea sponge | Deep sea | 30-2000 | Kosterfjord National Park, Sweden, West of Yttre Vattenholmen (58.876233, 11.101483) | 519541 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| Geodia_barretti_n_2022_12 | 144.8Mb | Scaffold | 2024 | CASHTH01 | pharmaceutical biosciences, uppsala university | PRJEB58046 | 71.50% | 31,884 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Whole genome sequence of the deep-sea sponge Geodia barretti (Metazoa, Porifera, Demospongiae) | G3 (Bethesda) | 37619978 |
| Gene ID | Description |
|---|---|
| CAI8055771.1 | LIPASE MATURATION FACTOR |
| CAI8055772.1 | LIPASE MATURATION FACTOR |
| CAI8055775.1 | SERINE-THREONINE PROTEIN KINASE |
| CAI8055774.1 | SERINE-THREONINE PROTEIN KINASE |
| CAI8055773.1 | |
| CAI8055776.1 | SERINE-THREONINE PROTEIN KINASE |
| CAI8055777.1 | |
| CAI8055778.1 | |
| CAI8055779.1 | RAB GTPASE-ACTIVATING PROTEIN 1-LIKE |
| CAI8055780.1 | |
| CAI8055781.1 | |
| CAI8055782.1 | KELCH PROTEIN |
| CAI8055783.1 | |
| CAI8055784.1 | |
| CAI8055785.1 | |
| CAI8055786.1 | |
| CAI8055787.1 | |
| CAI8055788.1 | |
| CAI8055789.1 | GH04784P |
| CAI8055790.1 | |
| CAI8055791.1 | ANKYRIN REPEAT CONTAINING |
| CAI8055792.1 | |
| CAI8055793.1 | ATP-DEPENDENT HELICASE HRQ1 |
| CAI8055794.1 | TOXIN RELE |
| CAI8055795.1 | |
| CAI8055796.1 | HIGH-AFFINITY BRANCHED-CHAIN AMINO ACID TRANSPORT ATP-BINDING PROTEIN LIVF |
| CAI8055797.1 | CONSERVED COMPONENT OF ABC TRANSPORTER FOR NATURAL AMINO ACIDS-RELATED |
| CAI8055798.1 | HIGH-AFFINITY BRANCHED-CHAIN AMINO ACID TRANSPORT SYSTEM PERMEASE |
| CAI8055799.1 | BRANCHED-CHAIN AMINO ACID TRANSPORT SYSTEM PERMEASE PROTEIN LIVH |
| CAI8055801.1 | ANKYRIN REPEAT DOMAIN-CONTAINING PROTEIN 39-RELATED |
| CAI8055800.1 | ANKYRIN REPEAT PROTEIN |
| CAI8055803.1 | ROLLING PEBBLES, ISOFORM B |
| CAI8055802.1 | ANKYRIN REPEAT FAMILY A |
| CAI8055805.1 | KYNURENINE 3-MONOOXYGENASE |
| CAI8055804.1 | KYNURENINE 3-MONOOXYGENASE |
| CAI8055806.1 | KYNURENINE 3-MONOOXYGENASE |
| CAI8055807.1 | |
| CAI8055808.1 | VESICLE PROTEIN SORTING-ASSOCIATED |
| CAI8055809.1 | |
| CAI8055810.1 | |
| CAI8055811.1 | UBIQUITIN-CONJUGATING ENZYME E2 |
| CAI8055816.1 | TNF RECEPTOR ASSOCIATED FACTOR |
| CAI8055813.1 | TNF RECEPTOR ASSOCIATED FACTOR |
| CAI8055814.1 | |
| CAI8055812.1 | TNF RECEPTOR ASSOCIATED FACTOR |
| CAI8055815.1 | TNF RECEPTOR ASSOCIATED FACTOR |
| CAI8055817.1 | |
| CAI8055818.1 | |
| CAI8055819.1 | PROTEIN CBG26694 |
| CAI8055821.1 | AT-RICH INTERACTIVE DOMAIN-CONTAINING PROTEIN 2 |
