Geodia barretti is a species of deep-sea sponge in the family Geodiidae, commonly found in cold-water ecosystems of the North Atlantic Ocean. This species thrives in nutrient-rich, cold-water environments and plays a crucial role in deep-sea ecosystems by filtering large volumes of water, contributing to nutrient cycling, and providing habitat for various marine organisms. Its unique adaptations to cold and high-pressure conditions make it an important subject for studying deep-sea biodiversity and ecological processes.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Geodia barretti | Porifera | deep-sea sponge | Deep sea | 30-2000 | Kosterfjord National Park, Sweden, West of Yttre Vattenholmen (58.876233, 11.101483) | 519541 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| Geodia_barretti_n_2022_12 | 144.8Mb | Scaffold | 2024 | CASHTH01 | pharmaceutical biosciences, uppsala university | PRJEB58046 | 71.50% | 31,884 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Whole genome sequence of the deep-sea sponge Geodia barretti (Metazoa, Porifera, Demospongiae) | G3 (Bethesda) | 37619978 |
| Gene ID | Description |
|---|---|
| CAI8056621.1 | PUP DEAMIDASE/DEPUPYLASE |
| CAI8056622.1 | PROTEASOME SUBUNIT ALPHA/BETA |
| CAI8056623.1 | PUP DEAMIDASE/DEPUPYLASE |
| CAI8056624.1 | AAA-FAMILY ATPASE |
| CAI8056625.1 | |
| CAI8056626.1 | |
| CAI8056627.1 | DNA HELICASE RECQ FAMILY MEMBER |
| CAI8056628.1 | RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE |
| CAI8056629.1 | |
| CAI8056630.1 | |
| CAI8056634.1 | SRCR DOMAIN-CONTAINING PROTEIN |
| CAI8056633.1 | SRCR DOMAIN-CONTAINING PROTEIN |
| CAI8056635.1 | SRCR DOMAIN-CONTAINING PROTEIN |
| CAI8056632.1 | SRCR DOMAIN-CONTAINING PROTEIN |
| CAI8056631.1 | SRCR DOMAIN-CONTAINING PROTEIN |
| CAI8056637.1 | SRCR DOMAIN-CONTAINING PROTEIN |
| CAI8056636.1 | SRCR DOMAIN-CONTAINING PROTEIN |
| CAI8056639.1 | |
| CAI8056638.1 | |
| CAI8056640.1 | |
| CAI8056642.1 | CATION EFFLUX PROTEIN/ ZINC TRANSPORTER |
| CAI8056641.1 | CATION EFFLUX PROTEIN/ ZINC TRANSPORTER |
| CAI8056644.1 | E3 UBIQUITIN-PROTEIN LIGASE MIB2 |
| CAI8056643.1 | ANKYRIN REPEAT CONTAINING |
| CAI8056645.1 | ANKYRIN REPEAT CONTAINING |
| CAI8056646.1 | UBIQUITIN CARBOXYL-TERMINAL HYDROLASE |
| CAI8056647.1 | |
| CAI8056648.1 | |
| CAI8056649.1 | |
| CAI8056650.1 | |
| CAI8056654.1 | ATP-DEPENDENT RNA HELICASE |
| CAI8056655.1 | ATP-DEPENDENT RNA HELICASE |
| CAI8056653.1 | ATP-DEPENDENT RNA HELICASE |
| CAI8056651.1 | ATP-DEPENDENT RNA HELICASE |
| CAI8056656.1 | ATP-DEPENDENT RNA HELICASE |
| CAI8056657.1 | ATP-DEPENDENT RNA HELICASE |
| CAI8056652.1 | ATP-DEPENDENT RNA HELICASE |
| CAI8056658.1 | ATP-DEPENDENT RNA HELICASE |
| CAI8056659.1 | ATP-DEPENDENT RNA HELICASE |
| CAI8056660.1 | ATP-DEPENDENT RNA HELICASE |
| CAI8056661.1 | ATP-DEPENDENT RNA HELICASE |
| CAI8056662.1 | |
| CAI8056663.1 | ATP-DEPENDENT RNA HELICASE |
| CAI8056666.1 | 26S PROTEASOME REGULATORY SUBUNIT |
| CAI8056667.1 | 26S PROTEASOME REGULATORY SUBUNIT |
| CAI8056665.1 | 26S PROTEASOME REGULATORY SUBUNIT |
| CAI8056664.1 | 26S PROTEASOME REGULATORY SUBUNIT |
| CAI8056668.1 | 26S PROTEASOME REGULATORY SUBUNIT |
| CAI8056669.1 | 26S PROTEASOME REGULATORY SUBUNIT |
| CAI8056670.1 | 26S PROTEASOME REGULATORY SUBUNIT |
