Geodia barretti is a species of deep-sea sponge in the family Geodiidae, commonly found in cold-water ecosystems of the North Atlantic Ocean. This species thrives in nutrient-rich, cold-water environments and plays a crucial role in deep-sea ecosystems by filtering large volumes of water, contributing to nutrient cycling, and providing habitat for various marine organisms. Its unique adaptations to cold and high-pressure conditions make it an important subject for studying deep-sea biodiversity and ecological processes.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Geodia barretti | Porifera | deep-sea sponge | Deep sea | 30-2000 | Kosterfjord National Park, Sweden, West of Yttre Vattenholmen (58.876233, 11.101483) | 519541 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| Geodia_barretti_n_2022_12 | 144.8Mb | Scaffold | 2024 | CASHTH01 | pharmaceutical biosciences, uppsala university | PRJEB58046 | 71.50% | 31,884 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Whole genome sequence of the deep-sea sponge Geodia barretti (Metazoa, Porifera, Demospongiae) | G3 (Bethesda) | 37619978 |
| Gene ID | Description |
|---|---|
| CAI8055171.1 | |
| CAI8055172.1 | TYROSINE-PROTEIN KINASE RECEPTOR |
| CAI8055173.1 | |
| CAI8055174.1 | UNCHARACTERIZED |
| CAI8055175.1 | UBIQUITIN-CONJUGATING ENZYME E2 |
| CAI8055176.1 | |
| CAI8055177.1 | PARATHYROID HORMONE-RESPONSIVE B1 GENE |
| CAI8055178.1 | PARATHYROID HORMONE-RESPONSIVE B1 GENE |
| CAI8055179.1 | |
| CAI8055180.1 | DEOXYCYTIDYLATE DEAMINASE-RELATED |
| CAI8055181.1 | DEOXYCYTIDYLATE DEAMINASE-RELATED |
| CAI8055183.1 | DEOXYCYTIDYLATE DEAMINASE-RELATED |
| CAI8055182.1 | DEOXYCYTIDYLATE DEAMINASE-RELATED |
| CAI8055184.1 | |
| CAI8055185.1 | |
| CAI8055186.1 | |
| CAI8055187.1 | |
| CAI8055188.1 | SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED |
| CAI8055190.1 | ENOYL-COA HYDRATASE-RELATED |
| CAI8055189.1 | ENOYL-COA HYDRATASE-RELATED |
| CAI8055191.1 | MAJOR FACILITATOR SUPERFAMILY DOMAIN-CONTAINING PROTEIN |
| CAI8055192.1 | |
| CAI8055193.1 | PALMITOYL-PROTEIN THIOESTERASE/DOLICHYLDIPHOSPHATASE 1 |
| CAI8055194.1 | |
| CAI8055195.1 | L-THREONINE 3-DEHYDROGENASE |
| CAI8055196.1 | |
| CAI8055197.1 | |
| CAI8055199.1 | |
| CAI8055198.1 | |
| CAI8055203.1 | TYROSINE-PROTEIN KINASE RECEPTOR |
| CAI8055202.1 | TYROSINE-PROTEIN KINASE RECEPTOR |
| CAI8055201.1 | TYROSINE-PROTEIN KINASE RECEPTOR |
| CAI8055200.1 | |
| CAI8055204.1 | TYROSINE-PROTEIN KINASE RECEPTOR |
| CAI8055205.1 | |
| CAI8055206.1 | |
| CAI8055207.1 | |
| CAI8055208.1 | |
| CAI8055209.1 | |
| CAI8055210.1 | |
| CAI8055212.1 | ANKYRIN REPEAT AND MYND DOMAIN-CONTAINING PROTEIN 2 |
| CAI8055213.1 | ANKYRIN REPEAT AND MYND DOMAIN-CONTAINING PROTEIN 2 |
| CAI8055211.1 | ANKYRIN REPEAT AND MYND DOMAIN-CONTAINING PROTEIN 2 |
| CAI8055216.1 | SCAFFOLD ATTACHMENT FACTOR B-RELATED |
| CAI8055218.1 | |
| CAI8055217.1 | SCAFFOLD ATTACHMENT FACTOR B-RELATED |
| CAI8055215.1 | SCAFFOLD ATTACHMENT FACTOR B-RELATED |
| CAI8055214.1 | SCAFFOLD ATTACHMENT FACTOR B-RELATED |
| CAI8055219.1 | |
| CAI8055220.1 |
