Geodia barretti is a species of deep-sea sponge in the family Geodiidae, commonly found in cold-water ecosystems of the North Atlantic Ocean. This species thrives in nutrient-rich, cold-water environments and plays a crucial role in deep-sea ecosystems by filtering large volumes of water, contributing to nutrient cycling, and providing habitat for various marine organisms. Its unique adaptations to cold and high-pressure conditions make it an important subject for studying deep-sea biodiversity and ecological processes.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Geodia barretti | Porifera | deep-sea sponge | Deep sea | 30-2000 | Kosterfjord National Park, Sweden, West of Yttre Vattenholmen (58.876233, 11.101483) | 519541 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| Geodia_barretti_n_2022_12 | 144.8Mb | Scaffold | 2024 | CASHTH01 | pharmaceutical biosciences, uppsala university | PRJEB58046 | 71.50% | 31,884 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Whole genome sequence of the deep-sea sponge Geodia barretti (Metazoa, Porifera, Demospongiae) | G3 (Bethesda) | 37619978 |
| Gene ID | Description |
|---|---|
| CAI8055021.1 | |
| CAI8055022.1 | |
| CAI8055023.1 | |
| CAI8055024.1 | F-BOX ONLY PROTEIN 3 |
| CAI8055025.1 | MITOCHONDRIAL RIBOSOMAL PROTEIN S23 |
| CAI8055026.1 | MITOCHONDRIAL RIBOSOMAL PROTEIN S23 |
| CAI8055029.1 | G PROTEIN-COUPLED RECEPTOR 157-RELATED |
| CAI8055028.1 | G PROTEIN-COUPLED RECEPTOR 157-RELATED |
| CAI8055027.1 | G PROTEIN-COUPLED RECEPTOR 157-RELATED |
| CAI8055030.1 | REPLICATION FACTOR C / DNA POLYMERASE III GAMMA-TAU SUBUNIT |
| CAI8055031.1 | TRANSMEMBRANE PROTEIN 199 |
| CAI8055034.1 | UBIQUITIN CARBOXYL-TERMINAL HYDROLASE |
| CAI8055035.1 | UBIQUITIN CARBOXYL-TERMINAL HYDROLASE |
| CAI8055032.1 | UBIQUITIN CARBOXYL-TERMINAL HYDROLASE |
| CAI8055033.1 | UBIQUITIN CARBOXYL-TERMINAL HYDROLASE |
| CAI8055036.1 | UBIQUITIN CARBOXYL-TERMINAL HYDROLASE |
| CAI8055037.1 | UBIQUITIN CARBOXYL-TERMINAL HYDROLASE |
| CAI8055038.1 | |
| CAI8055039.1 | EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT I |
| CAI8055040.1 | EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT I |
| CAI8055041.1 | BONUS, ISOFORM C-RELATED |
| CAI8055042.1 | |
| CAI8055043.1 | GLUTAMINE SYNTHETASE |
| CAI8055044.1 | EXSB FAMILY PROTEIN |
| CAI8055045.1 | PEPTIDE DEFORMYLASE |
| CAI8055046.1 | |
| CAI8055047.1 | |
| CAI8055048.1 | ADP-RIBOSE PYROPHOSPHATASE |
| CAI8055049.1 | |
| CAI8055050.1 | |
| CAI8055051.1 | HYDROXYPYRUVATE ISOMERASE |
| CAI8055052.1 | ALCOHOL DEHYDROGENASE |
| CAI8055053.1 | ALCOHOL DEHYDROGENASE |
| CAI8055054.1 | HEXOKINASE FAMILY MEMBER |
| CAI8055055.1 | HEXOKINASE FAMILY MEMBER |
| CAI8055056.1 | COLANIC BIOSYNTHESIS UDP-GLUCOSE LIPID CARRIER TRANSFERASE |
| CAI8055057.1 | OS02G0197800 PROTEIN |
| CAI8055060.1 | CYSTEINE DESULFURASE |
| CAI8055059.1 | CYSTEINE DESULFURASE |
| CAI8055058.1 | CYSTEINE DESULFURASE |
| CAI8055061.1 | FES CLUSTER ASSEMBLY PROTEIN SUF |
| CAI8055062.1 | FES CLUSTER ASSEMBLY PROTEIN SUF |
| CAI8055063.1 | ABC TRANSPORTER I FAMILY MEMBER 6, CHLOROPLASTIC |
| CAI8055065.1 | MOLYBDOPTERIN COFACTOR SYNTHESIS PROTEIN A |
| CAI8055064.1 | MOLYBDOPTERIN COFACTOR SYNTHESIS PROTEIN A |
| CAI8055066.1 | GTP-BINDING |
| CAI8055067.1 | TITIN |
| CAI8055068.1 | |
| CAI8055069.1 | |
| CAI8055070.1 |
