Geodia barretti is a species of deep-sea sponge in the family Geodiidae, commonly found in cold-water ecosystems of the North Atlantic Ocean. This species thrives in nutrient-rich, cold-water environments and plays a crucial role in deep-sea ecosystems by filtering large volumes of water, contributing to nutrient cycling, and providing habitat for various marine organisms. Its unique adaptations to cold and high-pressure conditions make it an important subject for studying deep-sea biodiversity and ecological processes.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Geodia barretti | Porifera | deep-sea sponge | Deep sea | 30-2000 | Kosterfjord National Park, Sweden, West of Yttre Vattenholmen (58.876233, 11.101483) | 519541 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| Geodia_barretti_n_2022_12 | 144.8Mb | Scaffold | 2024 | CASHTH01 | pharmaceutical biosciences, uppsala university | PRJEB58046 | 71.50% | 31,884 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Whole genome sequence of the deep-sea sponge Geodia barretti (Metazoa, Porifera, Demospongiae) | G3 (Bethesda) | 37619978 |
| Gene ID | Description |
|---|---|
| CAI8054921.1 | MEMBRANE COMPONENT OF TRANSPORTER-RELATED |
| CAI8054922.1 | IMPORT ATP-BINDING PROTEIN |
| CAI8054923.1 | IMPORT ATP-BINDING PROTEIN |
| CAI8054924.1 | |
| CAI8054925.1 | ACYLPYRUVASE |
| CAI8054926.1 | |
| CAI8054927.1 | PHOSPHOTRIESTERASE-RELATED |
| CAI8054928.1 | PHOSPHOTRIESTERASE-RELATED |
| CAI8054929.1 | ENDORIBONUCLEASE-RELATED |
| CAI8054930.1 | MOXR FAMILY PROTEIN |
| CAI8054932.1 | TYROSINE-PROTEIN KINASE RECEPTOR |
| CAI8054931.1 | 2-OXOISOVALERATE DEHYDROGENASE SUBUNIT BETA-RELATED |
| CAI8054933.1 | TYROSINE-PROTEIN KINASE RECEPTOR |
| CAI8054934.1 | TYROSINE-PROTEIN KINASE RECEPTOR |
| CAI8054935.1 | 2-OXOISOVALERATE DEHYDROGENASE SUBUNIT BETA-RELATED |
| CAI8054936.1 | 2-OXOISOVALERATE DEHYDROGENASE SUBUNIT BETA-RELATED |
| CAI8054937.1 | |
| CAI8054938.1 | |
| CAI8054939.1 | MUCOSA ASSOCIATED LYMPHOID TISSUE LYMPHOMA TRANSLOCATION PROTEIN 1/PARACASPASE |
| CAI8054940.1 | EPH RECEPTOR A5 |
| CAI8054942.1 | TYROSINE-PROTEIN KINASE RECEPTOR |
| CAI8054941.1 | TYROSINE-PROTEIN KINASE RECEPTOR |
| CAI8054943.1 | |
| CAI8054944.1 | GTPASE, IMAP FAMILY MEMBER-RELATED |
| CAI8054945.1 | |
| CAI8054946.1 | |
| CAI8054947.1 | |
| CAI8054948.1 | |
| CAI8054949.1 | |
| CAI8054950.1 | ALTERNATIVE OXIDASE |
| CAI8054951.1 | |
| CAI8054952.1 | |
| CAI8054955.1 | XRP2 PROTEIN |
| CAI8054954.1 | XRP2 PROTEIN |
| CAI8054953.1 | |
| CAI8054956.1 | XRP2 PROTEIN |
| CAI8054957.1 | XRP2 PROTEIN |
| CAI8054958.1 | |
| CAI8054959.1 | |
| CAI8054960.1 | |
| CAI8054961.1 | |
| CAI8054962.1 | |
| CAI8054963.1 | |
| CAI8054964.1 | |
| CAI8054966.1 | |
| CAI8054969.1 | |
| CAI8054968.1 | NEURALIZED |
| CAI8054965.1 | NEURALIZED |
| CAI8054970.1 | |
| CAI8054967.1 |
