Geodia barretti is a species of deep-sea sponge in the family Geodiidae, commonly found in cold-water ecosystems of the North Atlantic Ocean. This species thrives in nutrient-rich, cold-water environments and plays a crucial role in deep-sea ecosystems by filtering large volumes of water, contributing to nutrient cycling, and providing habitat for various marine organisms. Its unique adaptations to cold and high-pressure conditions make it an important subject for studying deep-sea biodiversity and ecological processes.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Geodia barretti | Porifera | deep-sea sponge | Deep sea | 30-2000 | Kosterfjord National Park, Sweden, West of Yttre Vattenholmen (58.876233, 11.101483) | 519541 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| Geodia_barretti_n_2022_12 | 144.8Mb | Scaffold | 2024 | CASHTH01 | pharmaceutical biosciences, uppsala university | PRJEB58046 | 71.50% | 31,884 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Whole genome sequence of the deep-sea sponge Geodia barretti (Metazoa, Porifera, Demospongiae) | G3 (Bethesda) | 37619978 |
| Gene ID | Description |
|---|---|
| CAI8055071.1 | BONUS, ISOFORM C-RELATED |
| CAI8055072.1 | |
| CAI8055073.1 | |
| CAI8055074.1 | |
| CAI8055075.1 | |
| CAI8055076.1 | ADIPOLIN |
| CAI8055077.1 | |
| CAI8055078.1 | NISCHARIN RELATED |
| CAI8055079.1 | |
| CAI8055080.1 | ADIPOLIN |
| CAI8055081.1 | ADIPOLIN |
| CAI8055082.1 | ADIPOLIN |
| CAI8055083.1 | ADIPOLIN |
| CAI8055087.1 | |
| CAI8055086.1 | FORMIN |
| CAI8055085.1 | |
| CAI8055084.1 | |
| CAI8055088.1 | |
| CAI8055089.1 | |
| CAI8055090.1 | |
| CAI8055091.1 | HYDRANTOINASE/DIHYDROPYRIMIDINASE FAMILY MEMBER |
| CAI8055093.1 | FIMBRIN/PLASTIN |
| CAI8055092.1 | FIMBRIN/PLASTIN |
| CAI8055094.1 | |
| CAI8055095.1 | |
| CAI8055096.1 | |
| CAI8055097.1 | ATP-BINDING CASSETTE SUB-FAMILY C |
| CAI8055098.1 | ATP-BINDING CASSETTE SUB-FAMILY C |
| CAI8055100.1 | FAD NADPH DEHYDROGENASE/OXIDOREDUCTASE |
| CAI8055101.1 | FAD NADPH DEHYDROGENASE/OXIDOREDUCTASE |
| CAI8055099.1 | |
| CAI8055102.1 | FAD NADPH DEHYDROGENASE/OXIDOREDUCTASE |
| CAI8055103.1 | FAD NADPH DEHYDROGENASE/OXIDOREDUCTASE |
| CAI8055104.1 | |
| CAI8055105.1 | ARGININE DEMETHYLASE AND LYSYL-HYDROXYLASE JMJD |
| CAI8055106.1 | ARGININE DEMETHYLASE AND LYSYL-HYDROXYLASE JMJD |
| CAI8055107.1 | ARCHAEMETZINCIN |
| CAI8055108.1 | NG5 |
| CAI8055109.1 | |
| CAI8055110.1 | |
| CAI8055111.1 | NG5 |
| CAI8055112.1 | |
| CAI8055113.1 | |
| CAI8055114.1 | |
| CAI8055116.1 | |
| CAI8055115.1 | |
| CAI8055117.1 | |
| CAI8055118.1 | SIGNAL RECOGNITION PARTICLE RECEPTOR SUBUNIT ALPHA |
| CAI8055119.1 | SIGNAL RECOGNITION PARTICLE RECEPTOR SUBUNIT ALPHA |
| CAI8055120.1 | SIGNAL RECOGNITION PARTICLE RECEPTOR SUBUNIT ALPHA |
