Geodia barretti is a species of deep-sea sponge in the family Geodiidae, commonly found in cold-water ecosystems of the North Atlantic Ocean. This species thrives in nutrient-rich, cold-water environments and plays a crucial role in deep-sea ecosystems by filtering large volumes of water, contributing to nutrient cycling, and providing habitat for various marine organisms. Its unique adaptations to cold and high-pressure conditions make it an important subject for studying deep-sea biodiversity and ecological processes.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Geodia barretti | Porifera | deep-sea sponge | Deep sea | 30-2000 | Kosterfjord National Park, Sweden, West of Yttre Vattenholmen (58.876233, 11.101483) | 519541 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| Geodia_barretti_n_2022_12 | 144.8Mb | Scaffold | 2024 | CASHTH01 | pharmaceutical biosciences, uppsala university | PRJEB58046 | 71.50% | 31,884 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Whole genome sequence of the deep-sea sponge Geodia barretti (Metazoa, Porifera, Demospongiae) | G3 (Bethesda) | 37619978 |
| Gene ID | Description |
|---|---|
| CAI8055271.1 | AMMONIUM TRANSPORTER |
| CAI8055272.1 | MALTODEXTRIN IMPORT ATP-BINDING PROTEIN MSMX |
| CAI8055273.1 | MALTODEXTRIN IMPORT ATP-BINDING PROTEIN MSMX |
| CAI8055274.1 | |
| CAI8055275.1 | CYTOCHROME C-TYPE BIOGENESIS PROTEIN CCMH |
| CAI8055276.1 | CYTOCHROME C-TYPE BIOGENESIS PROTEIN CCMH |
| CAI8055278.1 | |
| CAI8055277.1 | |
| CAI8055279.1 | CYTOCHROME C ASSEMBLY PROTEIN-RELATED |
| CAI8055280.1 | CYTOCHROME C ASSEMBLY PROTEIN-RELATED |
| CAI8055281.1 | CYTOCHROME C-TYPE BIOGENESIS PROTEIN CCME HOMOLOG, MITOCHONDRIAL |
| CAI8055282.1 | LEUCYL-TRNA SYNTHETASE |
| CAI8055283.1 | |
| CAI8055284.1 | PEROXYUREIDOACRYLATE/UREIDOACRYLATE AMIDOHYDROLASE-RELATED |
| CAI8055285.1 | PEROXYUREIDOACRYLATE/UREIDOACRYLATE AMIDOHYDROLASE-RELATED |
| CAI8055286.1 | TRANSAMIDASE |
| CAI8055287.1 | SLR0882 PROTEIN-RELATED |
| CAI8055288.1 | DIMETHYLADENOSINE TRANSFERASE |
| CAI8055289.1 | |
| CAI8055290.1 | GUANYLATE KINASE-RELATED |
| CAI8055292.1 | |
| CAI8055291.1 | |
| CAI8055293.1 | UNCHARACTERIZED |
| CAI8055294.1 | UNCHARACTERIZED |
| CAI8055300.1 | POLYKETIDE SYNTHASE-RELATED |
| CAI8055298.1 | POLYKETIDE SYNTHASE-RELATED |
| CAI8055297.1 | POLYKETIDE SYNTHASE-RELATED |
| CAI8055299.1 | POLYKETIDE SYNTHASE-RELATED |
| CAI8055296.1 | POLYKETIDE SYNTHASE-RELATED |
| CAI8055295.1 | POLYKETIDE SYNTHASE-RELATED |
| CAI8055301.1 | POLYKETIDE SYNTHASE-RELATED |
| CAI8055302.1 | ACYL CARRIER PROTEIN |
| CAI8055303.1 | MALONYL-COA-ACYL CARRIER PROTEIN TRANSACYLASE, MITOCHONDRIAL |
| CAI8055304.1 | 4-DIPHOSPHOCYTIDYL-2-C-METHYL-D-ERYTHRITOL KINASE, CHLOROPLASTIC |
| CAI8055305.1 | |
| CAI8055306.1 | RESPONSE REGULATOR RCP1-RELATED |
| CAI8055307.1 | RESPONSE REGULATOR RCP1-RELATED |
| CAI8055308.1 | 1-AMINOCYCLOPROPANE-1-CARBOXYLATE DEAMINASE-RELATED |
| CAI8055309.1 | TRANSPORT ATP-BINDING PROTEIN |
| CAI8055310.1 | LUCIFERASE-LIKE MONOOXYGENASE |
| CAI8055318.1 | UVRABC SYSTEM PROTEIN B |
| CAI8055317.1 | UVRABC SYSTEM PROTEIN B |
| CAI8055316.1 | UVRABC SYSTEM PROTEIN B |
| CAI8055315.1 | UVRABC SYSTEM PROTEIN B |
| CAI8055314.1 | UVRABC SYSTEM PROTEIN B |
| CAI8055312.1 | UVRABC SYSTEM PROTEIN B |
| CAI8055313.1 | UVRABC SYSTEM PROTEIN B |
| CAI8055311.1 | UVRABC SYSTEM PROTEIN B |
| CAI8055319.1 | F-BOX ONLY PROTEIN 3 |
| CAI8055320.1 | GTP CYCLOHYDROLASE I |
