Geodia barretti is a species of deep-sea sponge in the family Geodiidae, commonly found in cold-water ecosystems of the North Atlantic Ocean. This species thrives in nutrient-rich, cold-water environments and plays a crucial role in deep-sea ecosystems by filtering large volumes of water, contributing to nutrient cycling, and providing habitat for various marine organisms. Its unique adaptations to cold and high-pressure conditions make it an important subject for studying deep-sea biodiversity and ecological processes.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Geodia barretti | Porifera | deep-sea sponge | Deep sea | 30-2000 | Kosterfjord National Park, Sweden, West of Yttre Vattenholmen (58.876233, 11.101483) | 519541 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| Geodia_barretti_n_2022_12 | 144.8Mb | Scaffold | 2024 | CASHTH01 | pharmaceutical biosciences, uppsala university | PRJEB58046 | 71.50% | 31,884 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Whole genome sequence of the deep-sea sponge Geodia barretti (Metazoa, Porifera, Demospongiae) | G3 (Bethesda) | 37619978 |
| Gene ID | Description |
|---|---|
| CAI8054371.1 | |
| CAI8054372.1 | |
| CAI8054373.1 | |
| CAI8054374.1 | |
| CAI8054375.1 | |
| CAI8054376.1 | |
| CAI8054377.1 | |
| CAI8054378.1 | |
| CAI8054379.1 | |
| CAI8054380.1 | |
| CAI8054381.1 | |
| CAI8054382.1 | |
| CAI8054385.1 | |
| CAI8054384.1 | |
| CAI8054383.1 | |
| CAI8054386.1 | |
| CAI8054387.1 | |
| CAI8054392.1 | DEOXYCYTIDYLATE DEAMINASE-RELATED |
| CAI8054390.1 | DEOXYCYTIDYLATE DEAMINASE-RELATED |
| CAI8054391.1 | DEOXYCYTIDYLATE DEAMINASE-RELATED |
| CAI8054389.1 | DEOXYCYTIDYLATE DEAMINASE-RELATED |
| CAI8054388.1 | DEOXYCYTIDYLATE DEAMINASE-RELATED |
| CAI8054398.1 | DEOXYCYTIDYLATE DEAMINASE-RELATED |
| CAI8054397.1 | DEOXYCYTIDYLATE DEAMINASE-RELATED |
| CAI8054396.1 | DEOXYCYTIDYLATE DEAMINASE-RELATED |
| CAI8054395.1 | DEOXYCYTIDYLATE DEAMINASE-RELATED |
| CAI8054393.1 | DEOXYCYTIDYLATE DEAMINASE-RELATED |
| CAI8054394.1 | DEOXYCYTIDYLATE DEAMINASE-RELATED |
| CAI8054399.1 | DEOXYCYTIDYLATE DEAMINASE-RELATED |
| CAI8054400.1 | DEOXYCYTIDYLATE DEAMINASE-RELATED |
| CAI8054401.1 | |
| CAI8054404.1 | RHO GUANINE NUCLEOTIDE EXCHANGE FACTOR |
| CAI8054403.1 | RHO GUANINE NUCLEOTIDE EXCHANGE FACTOR |
| CAI8054402.1 | |
| CAI8054406.1 | RHO GUANINE NUCLEOTIDE EXCHANGE FACTOR |
| CAI8054405.1 | RHO GUANINE NUCLEOTIDE EXCHANGE FACTOR |
| CAI8054410.1 | RHO GUANINE NUCLEOTIDE EXCHANGE FACTOR |
| CAI8054409.1 | |
| CAI8054408.1 | |
| CAI8054407.1 | |
| CAI8054411.1 | RHO GUANINE NUCLEOTIDE EXCHANGE FACTOR |
| CAI8054412.1 | PROTEIN PHOSPHATASE 2C |
| CAI8054414.1 | PROKARYOTIC DNA TOPOISOMERASE |
| CAI8054415.1 | PROKARYOTIC DNA TOPOISOMERASE |
| CAI8054413.1 | |
| CAI8054416.1 | PROKARYOTIC DNA TOPOISOMERASE |
| CAI8054418.1 | NG5 |
| CAI8054417.1 | |
| CAI8054419.1 | |
| CAI8054420.1 | EPH RECEPTOR A5 |
