Geodia barretti is a species of deep-sea sponge in the family Geodiidae, commonly found in cold-water ecosystems of the North Atlantic Ocean. This species thrives in nutrient-rich, cold-water environments and plays a crucial role in deep-sea ecosystems by filtering large volumes of water, contributing to nutrient cycling, and providing habitat for various marine organisms. Its unique adaptations to cold and high-pressure conditions make it an important subject for studying deep-sea biodiversity and ecological processes.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Geodia barretti | Porifera | deep-sea sponge | Deep sea | 30-2000 | Kosterfjord National Park, Sweden, West of Yttre Vattenholmen (58.876233, 11.101483) | 519541 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
Geodia_barretti_n_2022_12 | 144.8Mb | Scaffold | 2024 | CASHTH01 | pharmaceutical biosciences, uppsala university | PRJEB58046 | 71.50% | 31,884 |
Title | Journal | Pubmed ID |
---|---|---|
Whole genome sequence of the deep-sea sponge Geodia barretti (Metazoa, Porifera, Demospongiae) | G3 (Bethesda) | 37619978 |
Gene ID | Description |
---|---|
CAI8054520.1 | |
CAI8054522.1 | |
CAI8054523.1 | |
CAI8054524.1 | |
CAI8054526.1 | |
CAI8054525.1 | |
CAI8054527.1 | |
CAI8054528.1 | |
CAI8054529.1 | |
CAI8054530.1 | |
CAI8054531.1 | |
CAI8054534.1 | - |
CAI8054533.1 | |
CAI8054532.1 | |
CAI8054535.1 | |
CAI8054536.1 | 3-OXOACYL-(ACYL-CARRIER-PROTEIN) REDUCTASE |
CAI8054537.1 | PROSTAGLANDIN REDUCTASE |
CAI8054538.1 | |
CAI8054540.1 | BLEOMYCIN HYDROLASE |
CAI8054539.1 | BLEOMYCIN HYDROLASE |
CAI8054541.1 | QUINONE OXIDOREDUCTASE PIG3-RELATED |
CAI8054542.1 | NADH-SPECIFIC METHYLGLYOXAL REDUCTASE-RELATED |
CAI8054543.1 | BCDNA.GH03377 |
CAI8054544.1 | SERINE HYDROXYMETHYLTRANSFERASE |
CAI8054545.1 | |
CAI8054546.1 | RUVB-RELATED REPTIN AND PONTIN |
CAI8054547.1 | 3-OXO-5-ALPHA-STEROID 4-DEHYDROGENASE |
CAI8054549.1 | E3 UBIQUITIN-PROTEIN LIGASE TOPORS |
CAI8054548.1 | E3 UBIQUITIN-PROTEIN LIGASE TOPORS |
CAI8054550.1 | |
CAI8054557.1 | CYTOSOLIC REGULATOR PIANISSIMO |
CAI8054556.1 | CYTOSOLIC REGULATOR PIANISSIMO |
CAI8054555.1 | CYTOSOLIC REGULATOR PIANISSIMO |
CAI8054554.1 | CYTOSOLIC REGULATOR PIANISSIMO |
CAI8054553.1 | CYTOSOLIC REGULATOR PIANISSIMO |
CAI8054552.1 | CYTOSOLIC REGULATOR PIANISSIMO |
CAI8054551.1 | CYTOSOLIC REGULATOR PIANISSIMO |
CAI8054558.1 | CYTOSOLIC REGULATOR PIANISSIMO |
CAI8054559.1 | CYTOSOLIC REGULATOR PIANISSIMO |
CAI8054561.1 | CYTOSOLIC REGULATOR PIANISSIMO |
CAI8054560.1 | CYTOSOLIC REGULATOR PIANISSIMO |
CAI8054563.1 | CYTOSOLIC REGULATOR PIANISSIMO |
CAI8054562.1 | CYTOSOLIC REGULATOR PIANISSIMO |
CAI8054564.1 | |
CAI8054566.1 | 41-2 PROTEIN ANTIGEN-RELATED |
CAI8054565.1 | 41-2 PROTEIN ANTIGEN-RELATED |
CAI8054567.1 | 41-2 PROTEIN ANTIGEN-RELATED |
CAI8054568.1 | 41-2 PROTEIN ANTIGEN-RELATED |
CAI8054569.1 | |
CAI8054570.1 |