Geodia barretti is a species of deep-sea sponge in the family Geodiidae, commonly found in cold-water ecosystems of the North Atlantic Ocean. This species thrives in nutrient-rich, cold-water environments and plays a crucial role in deep-sea ecosystems by filtering large volumes of water, contributing to nutrient cycling, and providing habitat for various marine organisms. Its unique adaptations to cold and high-pressure conditions make it an important subject for studying deep-sea biodiversity and ecological processes.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Geodia barretti | Porifera | deep-sea sponge | Deep sea | 30-2000 | Kosterfjord National Park, Sweden, West of Yttre Vattenholmen (58.876233, 11.101483) | 519541 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| Geodia_barretti_n_2022_12 | 144.8Mb | Scaffold | 2024 | CASHTH01 | pharmaceutical biosciences, uppsala university | PRJEB58046 | 71.50% | 31,884 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Whole genome sequence of the deep-sea sponge Geodia barretti (Metazoa, Porifera, Demospongiae) | G3 (Bethesda) | 37619978 |
| Gene ID | Description |
|---|---|
| CAI8054421.1 | |
| CAI8054422.1 | |
| CAI8054423.1 | |
| CAI8054424.1 | |
| CAI8054425.1 | CARBOHYDRATE SULFOTRANSFERASE |
| CAI8054426.1 | CARBOHYDRATE SULFOTRANSFERASE |
| CAI8054427.1 | CARBOHYDRATE SULFOTRANSFERASE |
| CAI8054428.1 | |
| CAI8054429.1 | |
| CAI8054430.1 | |
| CAI8054431.1 | |
| CAI8054432.1 | |
| CAI8054433.1 | FACTOR VIII-ASSOCIATED GENE 1 |
| CAI8054434.1 | FACTOR VIII-ASSOCIATED GENE 1 |
| CAI8054435.1 | |
| CAI8054436.1 | RNA METHYLASE-RELATED |
| CAI8054437.1 | SULFOPYRUVATE DECARBOXYLASE SUBUNIT ALPHA |
| CAI8054438.1 | SULFOPYRUVATE DECARBOXYLASE SUBUNIT ALPHA |
| CAI8054439.1 | PHENYLACETATE-COENZYME A LIGASE |
| CAI8054440.1 | ENOYL-COA HYDRATASE |
| CAI8054441.1 | ENOYL-COA HYDRATASE-RELATED |
| CAI8054442.1 | PHENYLACETIC ACID DEGRADATION PROTEIN PAA |
| CAI8054443.1 | |
| CAI8054444.1 | |
| CAI8054445.1 | ACETYL-COA SYNTHETASE |
| CAI8054446.1 | LIM DOMAIN-CONTAINING PROTEIN JUB |
| CAI8054447.1 | TALIN |
| CAI8054448.1 | COILED-COIL DOMAIN-CONTAINING PROTEIN 138 |
| CAI8054449.1 | SODIUM/CALCIUM EXCHANGER |
| CAI8054451.1 | UBIQUITIN SPECIFIC PROTEINASE |
| CAI8054450.1 | UBIQUITIN SPECIFIC PROTEINASE |
| CAI8054452.1 | UBIQUITIN SPECIFIC PROTEINASE |
| CAI8054454.1 | |
| CAI8054453.1 | |
| CAI8054455.1 | PSEUDOURIDYLATE SYNTHASE |
| CAI8054457.1 | PSEUDOURIDYLATE SYNTHASE |
| CAI8054456.1 | PSEUDOURIDYLATE SYNTHASE |
| CAI8054458.1 | PSEUDOURIDYLATE SYNTHASE |
| CAI8054459.1 | BONUS, ISOFORM C-RELATED |
| CAI8054460.1 | BONUS, ISOFORM C-RELATED |
| CAI8054461.1 | PEPTIDYL-GLYCINE ALPHA-AMIDATING MONOOXYGENASE |
| CAI8054463.1 | DNA POLYMERASE CATALYTIC SUBUNIT |
| CAI8054469.1 | DNA POLYMERASE CATALYTIC SUBUNIT |
| CAI8054470.1 | DNA POLYMERASE CATALYTIC SUBUNIT |
| CAI8054471.1 | DNA POLYMERASE CATALYTIC SUBUNIT |
| CAI8054468.1 | DNA POLYMERASE CATALYTIC SUBUNIT |
| CAI8054467.1 | DNA POLYMERASE CATALYTIC SUBUNIT |
| CAI8054466.1 | DNA POLYMERASE CATALYTIC SUBUNIT |
| CAI8054465.1 | DNA POLYMERASE CATALYTIC SUBUNIT |
| CAI8054464.1 | DNA POLYMERASE CATALYTIC SUBUNIT |
