Geodia barretti is a species of deep-sea sponge in the family Geodiidae, commonly found in cold-water ecosystems of the North Atlantic Ocean. This species thrives in nutrient-rich, cold-water environments and plays a crucial role in deep-sea ecosystems by filtering large volumes of water, contributing to nutrient cycling, and providing habitat for various marine organisms. Its unique adaptations to cold and high-pressure conditions make it an important subject for studying deep-sea biodiversity and ecological processes.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Geodia barretti | Porifera | deep-sea sponge | Deep sea | 30-2000 | Kosterfjord National Park, Sweden, West of Yttre Vattenholmen (58.876233, 11.101483) | 519541 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| Geodia_barretti_n_2022_12 | 144.8Mb | Scaffold | 2024 | CASHTH01 | pharmaceutical biosciences, uppsala university | PRJEB58046 | 71.50% | 31,884 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Whole genome sequence of the deep-sea sponge Geodia barretti (Metazoa, Porifera, Demospongiae) | G3 (Bethesda) | 37619978 |
| Gene ID | Description |
|---|---|
| CAI8054272.1 | RNA-BINDING ASCH DOMAIN PROTEIN |
| CAI8054273.1 | RNA-BINDING ASCH DOMAIN PROTEIN |
| CAI8054274.1 | RNA-BINDING ASCH DOMAIN PROTEIN |
| CAI8054271.1 | |
| CAI8054275.1 | RNA-BINDING ASCH DOMAIN PROTEIN |
| CAI8054276.1 | PHOSPHATIDYLINOSITOL-GLYCAN BIOSYNTHESIS CLASS X PROTEIN |
| CAI8054277.1 | PHOSPHATIDYLINOSITOL-GLYCAN BIOSYNTHESIS CLASS X PROTEIN |
| CAI8054278.1 | METALLOPROTEASE |
| CAI8054279.1 | METALLOPROTEASE |
| CAI8054280.1 | OLIGOPEPTIDE TRANSPORTER-RELATED |
| CAI8054281.1 | OLIGOPEPTIDE TRANSPORTER-RELATED |
| CAI8054282.1 | TNF RECEPTOR ASSOCIATED FACTOR |
| CAI8054283.1 | 7,8-DIHYDRO-8-OXOGUANINE TRIPHOSPHATASE |
| CAI8054290.1 | EXOCYST COMPLEX COMPONENT SEC6-RELATED |
| CAI8054286.1 | EXOCYST COMPLEX COMPONENT SEC6-RELATED |
| CAI8054289.1 | EXOCYST COMPLEX COMPONENT SEC6-RELATED |
| CAI8054288.1 | EXOCYST COMPLEX COMPONENT SEC6-RELATED |
| CAI8054287.1 | EXOCYST COMPLEX COMPONENT SEC6-RELATED |
| CAI8054285.1 | EXOCYST COMPLEX COMPONENT SEC6-RELATED |
| CAI8054284.1 | EXOCYST COMPLEX COMPONENT SEC6-RELATED |
| CAI8054291.1 | EXOCYST COMPLEX COMPONENT SEC6-RELATED |
| CAI8054292.1 | EXOCYST COMPLEX COMPONENT SEC6-RELATED |
| CAI8054295.1 | DNA POLYMERASE DELTA SUBUNIT 2 |
| CAI8054294.1 | DNA POLYMERASE DELTA SUBUNIT 2 |
| CAI8054293.1 | DNA POLYMERASE DELTA SUBUNIT 2 |
| CAI8054297.1 | G BETA-LIKE PROTEIN GBL |
| CAI8054296.1 | G BETA-LIKE PROTEIN GBL |
| CAI8054298.1 | TWEETY-RELATED |
| CAI8054299.1 | NG5 |
| CAI8054300.1 | NG5 |
| CAI8054305.1 | DUAL SPECIFICITY MITOGEN-ACTIVATED PROTEIN KINASE KINASE 5-RELATED |
| CAI8054306.1 | DUAL SPECIFICITY MITOGEN-ACTIVATED PROTEIN KINASE KINASE 5-RELATED |
| CAI8054304.1 | DUAL SPECIFICITY MITOGEN-ACTIVATED PROTEIN KINASE KINASE 5-RELATED |
| CAI8054303.1 | DUAL SPECIFICITY MITOGEN-ACTIVATED PROTEIN KINASE KINASE 5-RELATED |
| CAI8054302.1 | DUAL SPECIFICITY MITOGEN-ACTIVATED PROTEIN KINASE KINASE 5-RELATED |
| CAI8054301.1 | DUAL SPECIFICITY MITOGEN-ACTIVATED PROTEIN KINASE KINASE 5-RELATED |
| CAI8054309.1 | PHOSPHATIDYLINOSITOL 3-KINASE REGULATORY SUBUNIT |
| CAI8054308.1 | PHOSPHATIDYLINOSITOL 3-KINASE REGULATORY SUBUNIT |
| CAI8054307.1 | PHOSPHATIDYLINOSITOL 3-KINASE REGULATORY SUBUNIT |
| CAI8054310.1 | PHOSPHATIDYLINOSITOL 3-KINASE REGULATORY SUBUNIT |
| CAI8054311.1 | PHOSPHATIDYLINOSITOL 3-KINASE REGULATORY SUBUNIT |
| CAI8054312.1 | PHOSPHATIDYLINOSITOL 3-KINASE REGULATORY SUBUNIT |
| CAI8054313.1 | |
| CAI8054314.1 | |
| CAI8054315.1 | |
| CAI8054316.1 | |
| CAI8054317.1 | |
| CAI8054319.1 | SNF2/RAD54 FAMILY MEMBER |
| CAI8054318.1 | |
| CAI8054320.1 | PROTEASE S28 PRO-X CARBOXYPEPTIDASE-RELATED |
