Geodia barretti is a species of deep-sea sponge in the family Geodiidae, commonly found in cold-water ecosystems of the North Atlantic Ocean. This species thrives in nutrient-rich, cold-water environments and plays a crucial role in deep-sea ecosystems by filtering large volumes of water, contributing to nutrient cycling, and providing habitat for various marine organisms. Its unique adaptations to cold and high-pressure conditions make it an important subject for studying deep-sea biodiversity and ecological processes.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Geodia barretti | Porifera | deep-sea sponge | Deep sea | 30-2000 | Kosterfjord National Park, Sweden, West of Yttre Vattenholmen (58.876233, 11.101483) | 519541 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| Geodia_barretti_n_2022_12 | 144.8Mb | Scaffold | 2024 | CASHTH01 | pharmaceutical biosciences, uppsala university | PRJEB58046 | 71.50% | 31,884 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Whole genome sequence of the deep-sea sponge Geodia barretti (Metazoa, Porifera, Demospongiae) | G3 (Bethesda) | 37619978 |
| Gene ID | Description |
|---|---|
| CAI8053972.1 | MOLTING PROTEIN MLT-4 |
| CAI8053971.1 | MOLTING PROTEIN MLT-4 |
| CAI8053973.1 | |
| CAI8053975.1 | TENASCIN |
| CAI8053974.1 | CYTOKINE RECEPTOR |
| CAI8053976.1 | |
| CAI8053977.1 | |
| CAI8053978.1 | |
| CAI8053979.1 | |
| CAI8053980.1 | |
| CAI8053982.1 | |
| CAI8053981.1 | |
| CAI8053986.1 | |
| CAI8053987.1 | |
| CAI8053984.1 | |
| CAI8053985.1 | |
| CAI8053983.1 | |
| CAI8053988.1 | |
| CAI8053990.1 | VON WILLEBRAND FACTOR A DOMAIN-CONTAINING PROTEIN 8 |
| CAI8053989.1 | |
| CAI8053992.1 | VON WILLEBRAND FACTOR A DOMAIN-CONTAINING PROTEIN 8 |
| CAI8053991.1 | VON WILLEBRAND FACTOR A DOMAIN-CONTAINING PROTEIN 8 |
| CAI8053993.1 | VON WILLEBRAND FACTOR A DOMAIN-CONTAINING PROTEIN 8 |
| CAI8053994.1 | TRANSPOSASE |
| CAI8053995.1 | SEDOHEPTULOSE 7-PHOSPHATE ISOMERASE / DNAA INITIATOR-ASSOCIATING FACTOR FOR REPLICATION INITIATION |
| CAI8053996.1 | NICOTINATE-NUCLEOTIDE ADENYLYLTRANSFERASE-RELATED |
| CAI8053997.1 | NICOTINATE-NUCLEOTIDE ADENYLYLTRANSFERASE-RELATED |
| CAI8053998.1 | IOJAP SUPERFAMILY ORTHOLOG |
| CAI8053999.1 | GLYCEROL DEHYDROGENASE |
| CAI8054000.1 | MICROSOMAL DIPEPTIDASE |
| CAI8054002.1 | TRNA SULFURTRANSFERASE |
| CAI8054001.1 | TRNA SULFURTRANSFERASE |
| CAI8054003.1 | TETRATRICOPEPTIDE REPEAT PROTEIN 6 |
| CAI8054004.1 | ISOMERASE |
| CAI8054005.1 | GLUCOSAMINE-6-PHOSPHATE ISOMERASE |
| CAI8054006.1 | GLUCOSAMINE-6-PHOSPHATE ISOMERASE |
| CAI8054007.1 | GLUCOSAMINE-6-PHOSPHATE ISOMERASE |
| CAI8054010.1 | TRANSCRIPTIONAL REGULATORY PROTEIN |
| CAI8054009.1 | TRANSCRIPTIONAL REGULATORY PROTEIN |
| CAI8054008.1 | TRANSCRIPTIONAL REGULATORY PROTEIN |
| CAI8054011.1 | |
| CAI8054012.1 | CARBAMOYLTRANSFERASE FAMILY MEMBER |
| CAI8054013.1 | ALLANTOINASE |
| CAI8054014.1 | BIFUNCTIONAL PROTEIN PYRR |
| CAI8054015.1 | |
| CAI8054016.1 | 2-KETO-3-DEOXY-L-RHAMNONATE ALDOLASE |
| CAI8054017.1 | 3-DEHYDRO-SCYLLO-INOSOSE HYDROLASE |
| CAI8054018.1 | |
| CAI8054019.1 | |
| CAI8054020.1 | METALLOPEPTIDASE M28 FAMILY MEMBER |
