Geodia barretti is a species of deep-sea sponge in the family Geodiidae, commonly found in cold-water ecosystems of the North Atlantic Ocean. This species thrives in nutrient-rich, cold-water environments and plays a crucial role in deep-sea ecosystems by filtering large volumes of water, contributing to nutrient cycling, and providing habitat for various marine organisms. Its unique adaptations to cold and high-pressure conditions make it an important subject for studying deep-sea biodiversity and ecological processes.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Geodia barretti | Porifera | deep-sea sponge | Deep sea | 30-2000 | Kosterfjord National Park, Sweden, West of Yttre Vattenholmen (58.876233, 11.101483) | 519541 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| Geodia_barretti_n_2022_12 | 144.8Mb | Scaffold | 2024 | CASHTH01 | pharmaceutical biosciences, uppsala university | PRJEB58046 | 71.50% | 31,884 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Whole genome sequence of the deep-sea sponge Geodia barretti (Metazoa, Porifera, Demospongiae) | G3 (Bethesda) | 37619978 |
| Gene ID | Description |
|---|---|
| CAI8054067.1 | TYROSINE-PROTEIN KINASE RECEPTOR |
| CAI8054068.1 | TYROSINE-PROTEIN KINASE RECEPTOR |
| CAI8054073.1 | |
| CAI8054074.1 | |
| CAI8054075.1 | |
| CAI8054076.1 | |
| CAI8054077.1 | PROPERDIN |
| CAI8054079.1 | |
| CAI8054078.1 | |
| CAI8054080.1 | PROPERDIN |
| CAI8054081.1 | |
| CAI8054082.1 | |
| CAI8054086.1 | EF-HAND CALCIUM-BINDING DOMAIN-CONTAINING PROTEIN 6-RELATED |
| CAI8054084.1 | EF-HAND CALCIUM-BINDING DOMAIN-CONTAINING PROTEIN 6-RELATED |
| CAI8054085.1 | |
| CAI8054087.1 | SORTILIN RELATED |
| CAI8054088.1 | SORTILIN RELATED |
| CAI8054083.1 | |
| CAI8054089.1 | |
| CAI8054091.1 | ANKYRIN REPEAT PROTEIN |
| CAI8054090.1 | SURFACE ANTIGEN BSPA-LIKE-RELATED |
| CAI8054092.1 | |
| CAI8054093.1 | 2-5A-DEPENDENT RIBONUCLEASE |
| CAI8054094.1 | ANK_REP_REGION DOMAIN-CONTAINING PROTEIN |
| CAI8054096.1 | D-ALANYL-D-ALANINE CARBOXYPEPTIDASE |
| CAI8054097.1 | D-ALANYL-D-ALANINE CARBOXYPEPTIDASE |
| CAI8054095.1 | COATOMER SUBUNIT DELTA |
| CAI8054098.1 | D-ALANYL-D-ALANINE CARBOXYPEPTIDASE |
| CAI8054099.1 | D-ALANYL-D-ALANINE CARBOXYPEPTIDASE |
| CAI8054100.1 | D-ALANYL-D-ALANINE CARBOXYPEPTIDASE |
| CAI8054101.1 | |
| CAI8054102.1 | PROTEIN UNC-13 HOMOLOG |
| CAI8054103.1 | |
| CAI8054104.1 | OSJNBB0011N17.9 PROTEIN |
| CAI8054106.1 | |
| CAI8054105.1 | |
| CAI8054107.1 | |
| CAI8054108.1 | ANKYRIN REPEAT CONTAINING |
| CAI8054109.1 | ANKYRIN REPEAT CONTAINING |
| CAI8054110.1 | |
| CAI8054111.1 | |
| CAI8054112.1 | ATP-BINDING CASSETTE SUB-FAMILY C |
| CAI8054113.1 | ATP-BINDING CASSETTE SUB-FAMILY C |
| CAI8054118.1 | GASTRULATION DEFECTIVE PROTEIN 1-RELATED |
| CAI8054117.1 | GASTRULATION DEFECTIVE PROTEIN 1-RELATED |
| CAI8054116.1 | GASTRULATION DEFECTIVE PROTEIN 1-RELATED |
| CAI8054115.1 | GASTRULATION DEFECTIVE PROTEIN 1-RELATED |
| CAI8054114.1 | GASTRULATION DEFECTIVE PROTEIN 1-RELATED |
| CAI8054120.1 | GASTRULATION DEFECTIVE PROTEIN 1-RELATED |
| CAI8054119.1 |
