Geodia barretti is a species of deep-sea sponge in the family Geodiidae, commonly found in cold-water ecosystems of the North Atlantic Ocean. This species thrives in nutrient-rich, cold-water environments and plays a crucial role in deep-sea ecosystems by filtering large volumes of water, contributing to nutrient cycling, and providing habitat for various marine organisms. Its unique adaptations to cold and high-pressure conditions make it an important subject for studying deep-sea biodiversity and ecological processes.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Geodia barretti | Porifera | deep-sea sponge | Deep sea | 30-2000 | Kosterfjord National Park, Sweden, West of Yttre Vattenholmen (58.876233, 11.101483) | 519541 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| Geodia_barretti_n_2022_12 | 144.8Mb | Scaffold | 2024 | CASHTH01 | pharmaceutical biosciences, uppsala university | PRJEB58046 | 71.50% | 31,884 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Whole genome sequence of the deep-sea sponge Geodia barretti (Metazoa, Porifera, Demospongiae) | G3 (Bethesda) | 37619978 |
| Gene ID | Description |
|---|---|
| CAI8053018.1 | |
| CAI8053022.1 | |
| CAI8053023.1 | |
| CAI8053024.1 | |
| CAI8053025.1 | PROTEASE S28 PRO-X CARBOXYPEPTIDASE-RELATED |
| CAI8053026.1 | |
| CAI8053027.1 | |
| CAI8053028.1 | |
| CAI8053031.1 | |
| CAI8053030.1 | |
| CAI8053029.1 | |
| CAI8053032.1 | |
| CAI8053033.1 | |
| CAI8053034.1 | |
| CAI8053035.1 | |
| CAI8053038.1 | |
| CAI8053037.1 | |
| CAI8053036.1 | |
| CAI8053039.1 | |
| CAI8053040.1 | |
| CAI8053041.1 | |
| CAI8053043.1 | NACHT, LRR AND PYD DOMAINS-CONTAINING PROTEIN 12 |
| CAI8053042.1 | NACHT, LRR AND PYD DOMAINS-CONTAINING PROTEIN 12 |
| CAI8053044.1 | |
| CAI8053045.1 | |
| CAI8053046.1 | |
| CAI8053047.1 | |
| CAI8053048.1 | |
| CAI8053050.1 | PHOSPHATIDYLINOSITOL GLYCAN, CLASS N |
| CAI8053051.1 | PHOSPHATIDYLINOSITOL GLYCAN, CLASS N |
| CAI8053049.1 | |
| CAI8053052.1 | |
| CAI8053053.1 | |
| CAI8053054.1 | |
| CAI8053057.1 | WD40 REPEAT PROTEIN |
| CAI8053056.1 | WD40 REPEAT PROTEIN |
| CAI8053055.1 | WD40 REPEAT PROTEIN |
| CAI8053058.1 | WD REPEAT-CONTAINING PROTEIN POP1 |
| CAI8053059.1 | NCK-ASSOCIATED PROTEIN 1 |
| CAI8053060.1 | |
| CAI8053061.1 | FERM DOMAIN-CONTAINING PROTEIN 4 |
| CAI8053062.1 | FERM DOMAIN-CONTAINING PROTEIN 4 |
| CAI8053065.1 | DEOXYRIBONUCLEASE |
| CAI8053064.1 | DEOXYRIBONUCLEASE |
| CAI8053063.1 | DEOXYRIBONUCLEASE |
| CAI8053066.1 | ALPHA- AND GAMMA-ADAPTIN-BINDING PROTEIN P34 |
| CAI8053067.1 | ALPHA- AND GAMMA-ADAPTIN-BINDING PROTEIN P34 |
| CAI8053071.1 | IQ DOMAIN-CONTAINING PROTEIN H |
| CAI8053072.1 | IQ DOMAIN-CONTAINING PROTEIN H |
| CAI8053070.1 | IQ DOMAIN-CONTAINING PROTEIN H |
