Geodia barretti is a species of deep-sea sponge in the family Geodiidae, commonly found in cold-water ecosystems of the North Atlantic Ocean. This species thrives in nutrient-rich, cold-water environments and plays a crucial role in deep-sea ecosystems by filtering large volumes of water, contributing to nutrient cycling, and providing habitat for various marine organisms. Its unique adaptations to cold and high-pressure conditions make it an important subject for studying deep-sea biodiversity and ecological processes.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Geodia barretti | Porifera | deep-sea sponge | Deep sea | 30-2000 | Kosterfjord National Park, Sweden, West of Yttre Vattenholmen (58.876233, 11.101483) | 519541 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
Geodia_barretti_n_2022_12 | 144.8Mb | Scaffold | 2024 | CASHTH01 | pharmaceutical biosciences, uppsala university | PRJEB58046 | 71.50% | 31,884 |
Title | Journal | Pubmed ID |
---|---|---|
Whole genome sequence of the deep-sea sponge Geodia barretti (Metazoa, Porifera, Demospongiae) | G3 (Bethesda) | 37619978 |
Gene ID | Description |
---|---|
CAI8052721.1 | |
CAI8052722.1 | PHOSPHORIBOSYLFORMYLGLYCINAMIDINE SYNTHASE SUBUNIT PURL |
CAI8052723.1 | |
CAI8052724.1 | SLR1870 PROTEIN |
CAI8052725.1 | METALLOPHOSPHOESTERASE |
CAI8052726.1 | HEMK METHYLTRANSFERASE |
CAI8052727.1 | LD18447P |
CAI8052728.1 | |
CAI8052729.1 | |
CAI8052730.1 | ZINC PHOSPHODIESTERASE ELAC PROTEIN 2 |
CAI8052731.1 | 2-HYDROXYACID DEHYDROGENASE-RELATED |
CAI8052732.1 | |
CAI8052733.1 | |
CAI8052734.1 | |
CAI8052735.1 | |
CAI8052736.1 | |
CAI8052737.1 | QUORUM-QUENCHING LACTONASE YTNP-RELATED-RELATED |
CAI8052738.1 | AMINOTRANSFERASE |
CAI8052739.1 | |
CAI8052740.1 | MONOACYLGLYCEROL LIPASE |
CAI8052741.1 | 4-CARBOXYMUCONOLACTONE DECARBOXYLASE FAMILY PROTEIN |
CAI8052742.1 | SLR1406 PROTEIN |
CAI8052743.1 | |
CAI8052744.1 | POLYRIBONUCLEOTIDE NUCLEOTIDYLTRANSFERASE |
CAI8052745.1 | RIBOSOMAL PROTEIN S15, BACTERIAL AND ORGANELLAR |
CAI8052746.1 | |
CAI8052747.1 | |
CAI8052748.1 | |
CAI8052749.1 | |
CAI8052750.1 | |
CAI8052751.1 | |
CAI8052755.1 | SODIUM/CALCIUM EXCHANGER |
CAI8052754.1 | SODIUM/CALCIUM EXCHANGER |
CAI8052752.1 | SODIUM/CALCIUM EXCHANGER |
CAI8052753.1 | SODIUM/CALCIUM EXCHANGER |
CAI8052756.1 | SODIUM/CALCIUM EXCHANGER |
CAI8052757.1 | |
CAI8052758.1 | CYTOKINE RECEPTOR |
CAI8052760.1 | RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE |
CAI8052759.1 | RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE |
CAI8052761.1 | TENASCIN |
CAI8052762.1 | |
CAI8052763.1 | |
CAI8052764.1 | |
CAI8052765.1 | |
CAI8052766.1 | SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED |
CAI8052767.1 | SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED |
CAI8052768.1 | |
CAI8052769.1 | |
CAI8052770.1 | SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED |