About Geodia barretti

Geodia barretti is a species of deep-sea sponge in the family Geodiidae, commonly found in cold-water ecosystems of the North Atlantic Ocean. This species thrives in nutrient-rich, cold-water environments and plays a crucial role in deep-sea ecosystems by filtering large volumes of water, contributing to nutrient cycling, and providing habitat for various marine organisms. Its unique adaptations to cold and high-pressure conditions make it an important subject for studying deep-sea biodiversity and ecological processes.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Geodia barrettiPoriferadeep-sea spongeDeep sea30-2000Kosterfjord National Park, Sweden, West of Yttre Vattenholmen (58.876233, 11.101483)519541

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Geodia_barretti_n_2022_12144.8MbScaffold2024CASHTH01pharmaceutical biosciences, uppsala universityPRJEB5804671.50%31,884

References
TitleJournalPubmed ID
Whole genome sequence of the deep-sea sponge Geodia barretti (Metazoa, Porifera, Demospongiae)G3 (Bethesda)37619978

Gene Information

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Gene IDDescription
CAI8052771.1TYROSINE-PROTEIN KINASE
CAI8052772.1RHO-TYPE GTPASE ACTIVATING PROTEIN
CAI8052773.1ALANINE--GLYOXYLATE AMINOTRANSFERASE 2, MITOCHONDRIAL
CAI8052774.1ALANINE--GLYOXYLATE AMINOTRANSFERASE 2, MITOCHONDRIAL
CAI8052775.1
CAI8052776.1VACUOLAR ATP SYNTHASE SUBUNIT AC39
CAI8052778.1EXOSOME COMPLEX EXONUCLEASE RIBOSOMAL RNA PROCESSING PROTEIN
CAI8052779.1EXOSOME COMPLEX EXONUCLEASE RIBOSOMAL RNA PROCESSING PROTEIN
CAI8052777.1EXOSOME COMPLEX EXONUCLEASE RIBOSOMAL RNA PROCESSING PROTEIN
CAI8052782.1GLUTATHIONE S-TRANSFERASE KAPPA
CAI8052781.1GLUTATHIONE S-TRANSFERASE KAPPA
CAI8052783.1GLUTATHIONE S-TRANSFERASE KAPPA
CAI8052780.1GLUTATHIONE S-TRANSFERASE KAPPA
CAI8052784.1GLUTATHIONE S-TRANSFERASE KAPPA
CAI8052785.1GLUTATHIONE S-TRANSFERASE KAPPA
CAI8052786.1OLIGOSACCHARYLTRANSFERASE COMPLEX SUBUNIT OSTC
CAI8052792.1SMALL NUCLEAR RNA ACTIVATING COMPLEX, POLYPEPTIDE 1
CAI8052791.1SMALL NUCLEAR RNA ACTIVATING COMPLEX, POLYPEPTIDE 1
CAI8052790.1SMALL NUCLEAR RNA ACTIVATING COMPLEX, POLYPEPTIDE 1
CAI8052788.1SMALL NUCLEAR RNA ACTIVATING COMPLEX, POLYPEPTIDE 1
CAI8052789.1SMALL NUCLEAR RNA ACTIVATING COMPLEX, POLYPEPTIDE 1
CAI8052787.1SMALL NUCLEAR RNA ACTIVATING COMPLEX, POLYPEPTIDE 1
CAI8052793.1SORTING NEXIN-29-RELATED
CAI8052794.1
CAI8052795.137S RIBOSOMAL PROTEIN S26, MITOCHONDRIAL
CAI8052796.1LEUCINE-RICH REPEAT-CONTAINING
CAI8052801.1
CAI8052800.1
CAI8052799.1
CAI8052797.1
CAI8052798.1
CAI8052802.1
CAI8052803.1
CAI8052804.1
CAI8052807.1ZINC FINGER, RING/FYVE/PHD-TYPE
CAI8052805.1ZINC FINGER, RING/FYVE/PHD-TYPE
CAI8052806.1ZINC FINGER, RING/FYVE/PHD-TYPE
CAI8052809.1EXOSOME COMPLEX EXONUCLEASE RIBOSOMAL RNA PROCESSING PROTEIN
CAI8052808.1EXOSOME COMPLEX EXONUCLEASE RIBOSOMAL RNA PROCESSING PROTEIN
CAI8052810.1ENGULFMENT AND CELL MOTILITY
CAI8052811.1UNCHARACTERIZED
CAI8052813.1UNCHARACTERIZED
CAI8052812.1UNCHARACTERIZED
CAI8052814.1UNCHARACTERIZED
CAI8052815.1UNCHARACTERIZED
CAI8052816.1
CAI8052817.1REGULATOR OF G-PROTEIN SIGNALING PROTEIN-LIKE
CAI8052818.1DER1-LIKE PROTEIN, DERLIN
CAI8052820.1DER1-LIKE PROTEIN, DERLIN
CAI8052819.1DER1-LIKE PROTEIN, DERLIN
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