Geodia barretti is a species of deep-sea sponge in the family Geodiidae, commonly found in cold-water ecosystems of the North Atlantic Ocean. This species thrives in nutrient-rich, cold-water environments and plays a crucial role in deep-sea ecosystems by filtering large volumes of water, contributing to nutrient cycling, and providing habitat for various marine organisms. Its unique adaptations to cold and high-pressure conditions make it an important subject for studying deep-sea biodiversity and ecological processes.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Geodia barretti | Porifera | deep-sea sponge | Deep sea | 30-2000 | Kosterfjord National Park, Sweden, West of Yttre Vattenholmen (58.876233, 11.101483) | 519541 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| Geodia_barretti_n_2022_12 | 144.8Mb | Scaffold | 2024 | CASHTH01 | pharmaceutical biosciences, uppsala university | PRJEB58046 | 71.50% | 31,884 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Whole genome sequence of the deep-sea sponge Geodia barretti (Metazoa, Porifera, Demospongiae) | G3 (Bethesda) | 37619978 |
| Gene ID | Description |
|---|---|
| CAI8052520.1 | BTB/POZ DOMAIN-CONTAINING PROTEIN 9 |
| CAI8052521.1 | BTB/POZ DOMAIN-CONTAINING PROTEIN 9 |
| CAI8052523.1 | BTB/POZ DOMAIN-CONTAINING PROTEIN 9 |
| CAI8052524.1 | BTB/POZ DOMAIN-CONTAINING PROTEIN 9 |
| CAI8052525.1 | BTB/POZ DOMAIN-CONTAINING PROTEIN 9 |
| CAI8052526.1 | |
| CAI8052527.1 | |
| CAI8052528.1 | REVERSE TRANSCRIPTASE |
| CAI8052529.1 | REVERSE TRANSCRIPTASE |
| CAI8052530.1 | |
| CAI8052531.1 | H REPEAT-ASSOCIATED PREDICTED TRANSPOSASE |
| CAI8052532.1 | HOMOACONITASE, MITOCHONDRIAL-RELATED |
| CAI8052533.1 | HOMOACONITASE, MITOCHONDRIAL-RELATED |
| CAI8052534.1 | 3-ISOPROPYLMALATE DEHYDRATASE SMALL SUBUNIT 2-RELATED-RELATED |
| CAI8052535.1 | |
| CAI8052536.1 | OLIGOPEPTIDE TRANSPORT SYSTEM PERMEASE PROTEIN APPC |
| CAI8052537.1 | DIPEPTIDE TRANSPORT SYSTEM PERMEASE PROTEIN DPPB-RELATED |
| CAI8052538.1 | DIPEPTIDE TRANSPORT SYSTEM PERMEASE PROTEIN DPPB-RELATED |
| CAI8052539.1 | PROBABLE 2-DEHYDROPANTOATE 2-REDUCTASE |
| CAI8052540.1 | LONG-CHAIN-FATTY-ACID--COA LIGASE |
| CAI8052541.1 | ACYL-COA SYNTHETASE |
| CAI8052542.1 | KETOACID-COENZYME A TRANSFERASE |
| CAI8052543.1 | |
| CAI8052544.1 | KETOACID-COENZYME A TRANSFERASE |
| CAI8052545.1 | KETOACID-COENZYME A TRANSFERASE |
| CAI8052546.1 | THIAZOLE SYNTHASE |
| CAI8052547.1 | THIAZOLE SYNTHASE |
| CAI8052548.1 | THIAZOLE SYNTHASE |
| CAI8052549.1 | THIAMINE-PHOSPHATE PYROPHOSPHORYLASE |
| CAI8052550.1 | THIAMINE-PHOSPHATE PYROPHOSPHORYLASE |
| CAI8052551.1 | SULFUR CARRIER PROTEIN THIS |
| CAI8052552.1 | 2-IMINOBUTANOATE/2-IMINOPROPANOATE DEAMINASE RIDA |
| CAI8052553.1 | 60 KDA HEAT SHOCK PROTEIN, MITOCHONDRIAL |
| CAI8052554.1 | 60 KDA HEAT SHOCK PROTEIN, MITOCHONDRIAL |
| CAI8052555.1 | 10 KDA HEAT SHOCK PROTEIN |
| CAI8052556.1 | REGULATOR OF RPOS |
| CAI8052557.1 | REGULATOR OF RPOS |
| CAI8052558.1 | PROTEIN-METHIONINE-SULFOXIDE REDUCTASE |
| CAI8052559.1 | |
| CAI8052560.1 | |
| CAI8052561.1 | TREHALASE |
| CAI8052562.1 | TREHALASE |
| CAI8052563.1 | LIPOPROTEIN-RELATED |
| CAI8052564.1 | GLUCOSE-METHANOL-CHOLINE GMC OXIDOREDUCTASE |
| CAI8052565.1 | GLUCOSE-METHANOL-CHOLINE GMC OXIDOREDUCTASE |
| CAI8052566.1 | PROTEIN SMF |
| CAI8052569.1 | |
| CAI8052568.1 | |
| CAI8052567.1 | |
| CAI8052570.1 | CT120 PROTEIN |
