Geodia barretti is a species of deep-sea sponge in the family Geodiidae, commonly found in cold-water ecosystems of the North Atlantic Ocean. This species thrives in nutrient-rich, cold-water environments and plays a crucial role in deep-sea ecosystems by filtering large volumes of water, contributing to nutrient cycling, and providing habitat for various marine organisms. Its unique adaptations to cold and high-pressure conditions make it an important subject for studying deep-sea biodiversity and ecological processes.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Geodia barretti | Porifera | deep-sea sponge | Deep sea | 30-2000 | Kosterfjord National Park, Sweden, West of Yttre Vattenholmen (58.876233, 11.101483) | 519541 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| Geodia_barretti_n_2022_12 | 144.8Mb | Scaffold | 2024 | CASHTH01 | pharmaceutical biosciences, uppsala university | PRJEB58046 | 71.50% | 31,884 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Whole genome sequence of the deep-sea sponge Geodia barretti (Metazoa, Porifera, Demospongiae) | G3 (Bethesda) | 37619978 |
| Gene ID | Description |
|---|---|
| CAI8052269.1 | SIDEROFLEXIN |
| CAI8052272.1 | SIDEROFLEXIN |
| CAI8052276.1 | UNCHARACTERIZED |
| CAI8052277.1 | UNCHARACTERIZED |
| CAI8052274.1 | UNCHARACTERIZED |
| CAI8052275.1 | UNCHARACTERIZED |
| CAI8052273.1 | UNCHARACTERIZED |
| CAI8052278.1 | UNCHARACTERIZED |
| CAI8052280.1 | UNCHARACTERIZED |
| CAI8052279.1 | UNCHARACTERIZED |
| CAI8052281.1 | UNCHARACTERIZED |
| CAI8052284.1 | PHYTOENE DEHYDROGENASE |
| CAI8052286.1 | PHYTOENE DEHYDROGENASE |
| CAI8052287.1 | PHYTOENE DEHYDROGENASE |
| CAI8052285.1 | PHYTOENE DEHYDROGENASE |
| CAI8052283.1 | PHYTOENE DEHYDROGENASE |
| CAI8052282.1 | PHYTOENE DEHYDROGENASE |
| CAI8052288.1 | PHYTOENE DEHYDROGENASE |
| CAI8052291.1 | |
| CAI8052290.1 | PROTRUDIN |
| CAI8052289.1 | PROTRUDIN |
| CAI8052292.1 | |
| CAI8052293.1 | |
| CAI8052294.1 | RING/U-BOX SUPERFAMILY PROTEIN |
| CAI8052296.1 | DOCKING PROTEIN RELATED |
| CAI8052295.1 | DOCKING PROTEIN RELATED |
| CAI8052298.1 | TEX261 PROTEIN |
| CAI8052297.1 | TEX261 PROTEIN |
| CAI8052299.1 | TEX261 PROTEIN |
| CAI8052300.1 | SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED |
| CAI8052302.1 | PROTEIN PHOSPHATASE PP2A REGULATORY SUBUNIT B |
| CAI8052301.1 | PROTEIN PHOSPHATASE PP2A REGULATORY SUBUNIT B |
| CAI8052303.1 | PROTEIN PHOSPHATASE PP2A REGULATORY SUBUNIT B |
| CAI8052304.1 | PROTEIN PHOSPHATASE PP2A REGULATORY SUBUNIT B |
| CAI8052305.1 | PROTEIN PHOSPHATASE PP2A REGULATORY SUBUNIT B |
| CAI8052306.1 | PROTEIN PHOSPHATASE PP2A REGULATORY SUBUNIT B |
| CAI8052307.1 | SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED |
| CAI8052309.1 | WOLFRAMIN |
| CAI8052308.1 | |
| CAI8052310.1 | |
| CAI8052311.1 | UNCHARACTERIZED |
| CAI8052312.1 | MAJOR FACILITATOR SUPERFAMILY DOMAIN-CONTAINING PROTEIN 10 |
| CAI8052313.1 | |
| CAI8052315.1 | HOMEOBOX PROTEIN HHEX |
| CAI8052314.1 | |
| CAI8052316.1 | |
| CAI8052317.1 | TYPE I INOSITOL-1,4,5-TRISPHOSPHATE 5-PHOSPHATASE |
| CAI8052318.1 | IRON-SULFUR DOMAIN CONTAINING PROTEIN |
| CAI8052319.1 | IRON-SULFUR DOMAIN CONTAINING PROTEIN |
| CAI8052320.1 | QUINONE OXIDOREDUCTASE PIG3-RELATED |
