Geodia barretti is a species of deep-sea sponge in the family Geodiidae, commonly found in cold-water ecosystems of the North Atlantic Ocean. This species thrives in nutrient-rich, cold-water environments and plays a crucial role in deep-sea ecosystems by filtering large volumes of water, contributing to nutrient cycling, and providing habitat for various marine organisms. Its unique adaptations to cold and high-pressure conditions make it an important subject for studying deep-sea biodiversity and ecological processes.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Geodia barretti | Porifera | deep-sea sponge | Deep sea | 30-2000 | Kosterfjord National Park, Sweden, West of Yttre Vattenholmen (58.876233, 11.101483) | 519541 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| Geodia_barretti_n_2022_12 | 144.8Mb | Scaffold | 2024 | CASHTH01 | pharmaceutical biosciences, uppsala university | PRJEB58046 | 71.50% | 31,884 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Whole genome sequence of the deep-sea sponge Geodia barretti (Metazoa, Porifera, Demospongiae) | G3 (Bethesda) | 37619978 |
| Gene ID | Description |
|---|---|
| CAI8052422.1 | ANGIOMOTIN |
| CAI8052421.1 | ANGIOMOTIN |
| CAI8052423.1 | |
| CAI8052424.1 | |
| CAI8052425.1 | RNA EXONUCLEASE REXO1 / RECO3 FAMILY MEMBER-RELATED |
| CAI8052426.1 | WD40 REPEAT PROTEIN 12, 37 |
| CAI8052428.1 | FIDIPIDINE |
| CAI8052427.1 | FIDIPIDINE |
| CAI8052429.1 | |
| CAI8052430.1 | CYTOKINE RECEPTOR |
| CAI8052431.1 | SODIUM/DICARBOXYLATE SYMPORTER-RELATED |
| CAI8052432.1 | CRYPTOCHROME |
| CAI8052433.1 | ACETYL-COA C-ACETYLTRANSFERASE |
| CAI8052434.1 | ACETYL-COA C-ACETYLTRANSFERASE |
| CAI8052435.1 | SULFITE REDUCTASE |
| CAI8052442.1 | DYNEIN INTERMEDIATE CHAIN |
| CAI8052440.1 | DYNEIN INTERMEDIATE CHAIN |
| CAI8052441.1 | DYNEIN INTERMEDIATE CHAIN |
| CAI8052439.1 | DYNEIN INTERMEDIATE CHAIN |
| CAI8052438.1 | DYNEIN INTERMEDIATE CHAIN |
| CAI8052437.1 | |
| CAI8052436.1 | |
| CAI8052443.1 | DYNEIN INTERMEDIATE CHAIN |
| CAI8052444.1 | DYNEIN INTERMEDIATE CHAIN |
| CAI8052445.1 | DYNEIN INTERMEDIATE CHAIN |
| CAI8052446.1 | DYNEIN INTERMEDIATE CHAIN |
| CAI8052447.1 | DYNEIN INTERMEDIATE CHAIN |
| CAI8052448.1 | DYNEIN INTERMEDIATE CHAIN |
| CAI8052449.1 | CYSTINOSIN |
| CAI8052450.1 | 39S RIBOSOMAL PROTEIN L55, MITOCHONDRIAL |
| CAI8052451.1 | 39S RIBOSOMAL PROTEIN L55, MITOCHONDRIAL |
| CAI8052452.1 | ANTI-SILENCING PROTEIN 1 |
| CAI8052458.1 | NUCLEAR PORE COMPLEX PROTEIN NUP155 |
| CAI8052455.1 | NUCLEAR PORE COMPLEX PROTEIN NUP155 |
| CAI8052454.1 | NUCLEAR PORE COMPLEX PROTEIN NUP155 |
| CAI8052457.1 | NUCLEAR PORE COMPLEX PROTEIN NUP155 |
| CAI8052456.1 | NUCLEAR PORE COMPLEX PROTEIN NUP155 |
| CAI8052453.1 | NUCLEAR PORE COMPLEX PROTEIN NUP155 |
| CAI8052459.1 | NUCLEAR PORE COMPLEX PROTEIN NUP155 |
| CAI8052460.1 | NUCLEAR PORE COMPLEX PROTEIN NUP155 |
| CAI8052461.1 | NUCLEAR PORE COMPLEX PROTEIN NUP155 |
| CAI8052467.1 | MANNOSYL-OLIGOSACCHARIDE GLUCOSIDASE |
| CAI8052466.1 | MANNOSYL-OLIGOSACCHARIDE GLUCOSIDASE |
| CAI8052465.1 | MANNOSYL-OLIGOSACCHARIDE GLUCOSIDASE |
| CAI8052464.1 | |
| CAI8052463.1 | MANNOSYL-OLIGOSACCHARIDE GLUCOSIDASE |
| CAI8052462.1 | |
| CAI8052468.1 | MANNOSYL-OLIGOSACCHARIDE GLUCOSIDASE |
| CAI8052469.1 | |
| CAI8052470.1 | D-GALACTONATE DEHYDRATASE-RELATED |
