About Geodia barretti

Geodia barretti is a species of deep-sea sponge in the family Geodiidae, commonly found in cold-water ecosystems of the North Atlantic Ocean. This species thrives in nutrient-rich, cold-water environments and plays a crucial role in deep-sea ecosystems by filtering large volumes of water, contributing to nutrient cycling, and providing habitat for various marine organisms. Its unique adaptations to cold and high-pressure conditions make it an important subject for studying deep-sea biodiversity and ecological processes.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Geodia barrettiPoriferadeep-sea spongeDeep sea30-2000Kosterfjord National Park, Sweden, West of Yttre Vattenholmen (58.876233, 11.101483)519541

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Geodia_barretti_n_2022_12144.8MbScaffold2024CASHTH01pharmaceutical biosciences, uppsala universityPRJEB5804671.50%31,884

References
TitleJournalPubmed ID
Whole genome sequence of the deep-sea sponge Geodia barretti (Metazoa, Porifera, Demospongiae)G3 (Bethesda)37619978

Gene Information

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Gene IDDescription
CAI8052871.1
CAI8052872.1
CAI8052873.1
CAI8052874.1
CAI8052875.1TYROSINE-PROTEIN KINASE RECEPTOR
CAI8052876.1JITTERBUG, ISOFORM N
CAI8052877.1
CAI8052879.1
CAI8052878.1
CAI8052880.1
CAI8052884.1ANK_REP_REGION DOMAIN-CONTAINING PROTEIN-RELATED
CAI8052885.1ANKYRIN REPEAT AND PROTEIN KINASE DOMAIN-CONTAINING PROTEIN
CAI8052883.1ANK_REP_REGION DOMAIN-CONTAINING PROTEIN-RELATED
CAI8052882.1ANKYRIN REPEAT FAMILY A
CAI8052881.1
CAI8052886.1ANKYRIN REPEAT FAMILY PROTEIN
CAI8052887.1ANKYRIN REPEAT PROTEIN
CAI8052888.1ANKYRIN REPEAT PROTEIN
CAI8052889.1CYCLIN-DEPENDENT KINASE INHIBITOR 2C-RELATED
CAI8052890.1ANKYRIN REPEAT FAMILY PROTEIN
CAI8052891.1
CAI8052892.1
CAI8052894.1UPF0602 PROTEIN C4ORF47
CAI8052893.1UPF0602 PROTEIN C4ORF47
CAI8052895.1UPF0602 PROTEIN C4ORF47
CAI8052896.1
CAI8052897.1
CAI8052898.1
CAI8052899.1TELOMERASE REVERSE TRANSCRIPTASE
CAI8052900.1TELOMERASE REVERSE TRANSCRIPTASE
CAI8052901.1TELOMERASE REVERSE TRANSCRIPTASE
CAI8052902.1TELOMERASE REVERSE TRANSCRIPTASE
CAI8052907.1NUCLEAR TRANSCRIPTION FACTOR, X-BOX BINDING 1 NFX1
CAI8052906.1NUCLEAR TRANSCRIPTION FACTOR, X-BOX BINDING 1 NFX1
CAI8052904.1NUCLEAR TRANSCRIPTION FACTOR, X-BOX BINDING 1 NFX1
CAI8052905.1NUCLEAR TRANSCRIPTION FACTOR, X-BOX BINDING 1 NFX1
CAI8052903.1POLY ADP-RIBOSE POLYMERASE FAMILY, MEMBER PARP
CAI8052911.1NUCLEAR TRANSCRIPTION FACTOR, X-BOX BINDING 1 NFX1
CAI8052909.1POLY ADP-RIBOSE POLYMERASE FAMILY, MEMBER PARP
CAI8052910.1
CAI8052908.1POLY ADP-RIBOSE POLYMERASE FAMILY, MEMBER PARP
CAI8052912.1NUCLEAR TRANSCRIPTION FACTOR, X-BOX BINDING 1 NFX1
CAI8052913.1NUCLEAR TRANSCRIPTION FACTOR, X-BOX BINDING 1 NFX1
CAI8052914.1
CAI8052915.1
CAI8052916.1PERIPLASMIC BINDING COMPONENT OF ABC TRANSPORTER
CAI8052917.1
CAI8052918.1TRANSMEMBRANE CHANNEL-RELATED
CAI8052920.1RIBOSOMAL PROTEIN S6 KINASE
CAI8052922.1SERINE/THREONINE-PROTEIN KINASE
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