Geodia barretti is a species of deep-sea sponge in the family Geodiidae, commonly found in cold-water ecosystems of the North Atlantic Ocean. This species thrives in nutrient-rich, cold-water environments and plays a crucial role in deep-sea ecosystems by filtering large volumes of water, contributing to nutrient cycling, and providing habitat for various marine organisms. Its unique adaptations to cold and high-pressure conditions make it an important subject for studying deep-sea biodiversity and ecological processes.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Geodia barretti | Porifera | deep-sea sponge | Deep sea | 30-2000 | Kosterfjord National Park, Sweden, West of Yttre Vattenholmen (58.876233, 11.101483) | 519541 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| Geodia_barretti_n_2022_12 | 144.8Mb | Scaffold | 2024 | CASHTH01 | pharmaceutical biosciences, uppsala university | PRJEB58046 | 71.50% | 31,884 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Whole genome sequence of the deep-sea sponge Geodia barretti (Metazoa, Porifera, Demospongiae) | G3 (Bethesda) | 37619978 |
| Gene ID | Description |
|---|---|
| CAI8052921.1 | SERINE/THREONINE-PROTEIN KINASE |
| CAI8052919.1 | SERINE/THREONINE-PROTEIN KINASE |
| CAI8052923.1 | SERINE/THREONINE-PROTEIN KINASE |
| CAI8052924.1 | PROTEIN PHOSPHATASE 1 REGULATORY SUBUNIT SDS22-RELATED |
| CAI8052925.1 | THIAMINE PYROPHOSPHATE ENZYMES |
| CAI8052926.1 | DIHYDROLIPOAMIDE ACETYL/SUCCINYL-TRANSFERASE-RELATED |
| CAI8052927.1 | PYRUVATE-FLAVODOXIN OXIDOREDUCTASE-RELATED |
| CAI8052928.1 | DISULFIDE OXIDOREDUCTASE |
| CAI8052930.1 | DISULFIDE OXIDOREDUCTASE |
| CAI8052929.1 | DISULFIDE OXIDOREDUCTASE |
| CAI8052931.1 | SEC-INDEPENDENT PROTEIN TRANSLOCASE PROTEIN TATA |
| CAI8052932.1 | SEC-INDEPENDENT PROTEIN TRANSLOCASE PROTEIN TATC |
| CAI8052933.1 | RNA M5U METHYLTRANSFERASE |
| CAI8052934.1 | GEO12009P1 |
| CAI8052935.1 | GEO12009P1 |
| CAI8052936.1 | LUCIFERASE-LIKE MONOOXYGENASE |
| CAI8052937.1 | GAMMA-GLUTAMYLTRANSPEPTIDASE (AFU_ORTHOLOGUE AFUA_4G13580) |
| CAI8052938.1 | GAMMA-GLUTAMYLTRANSPEPTIDASE (AFU_ORTHOLOGUE AFUA_4G13580) |
| CAI8052939.1 | NUDIX HYDROLASE RELATED |
| CAI8052940.1 | ATP-DEPENDENT HELICASE LHR-RELATED-RELATED |
| CAI8052941.1 | ASPARTYL/LYSYL-TRNA SYNTHETASE |
| CAI8052943.1 | ASPARTYL/LYSYL-TRNA SYNTHETASE |
| CAI8052942.1 | ASPARTYL/LYSYL-TRNA SYNTHETASE |
| CAI8052945.1 | ASPARTYL/LYSYL-TRNA SYNTHETASE |
| CAI8052944.1 | ASPARTYL/LYSYL-TRNA SYNTHETASE |
| CAI8052946.1 | ASPARTYL/LYSYL-TRNA SYNTHETASE |
| CAI8052948.1 | ASPARTYL/LYSYL-TRNA SYNTHETASE |
| CAI8052947.1 | ASPARTYL/LYSYL-TRNA SYNTHETASE |
| CAI8052949.1 | FRUCTOSE-1,6-BISPHOSPHATE ALDOLASE/PHOSPHATASE |
| CAI8052950.1 | ENOYL-[ACYL-CARRIER-PROTEIN] REDUCTASE |
| CAI8052951.1 | 2-PHOSPHO-L-LACTATE TRANSFERASE |
| CAI8052952.1 | 2-PHOSPHO-L-LACTATE TRANSFERASE |
| CAI8052953.1 | FO SYNTHASE (COFH) |
| CAI8052954.1 | FO SYNTHASE (COFH) |
| CAI8052956.1 | - |
| CAI8052955.1 | - |
| CAI8052957.1 | POLYKETIDE SYNTHASE-RELATED |
| CAI8052958.1 | FOLYLPOLYGLUTAMATE SYNTHASE-RELATED |
| CAI8052959.1 | ALKANESULFONATE MONOOXYGENASE |
| CAI8052960.1 | ANAEROBIC MAGNESIUM-PROTOPORPHYRIN IX MONOMETHYL ESTER CYCLASE-RELATED |
| CAI8052961.1 | POLYKETIDE SYNTHASE-RELATED |
| CAI8052962.1 | POLYKETIDE SYNTHASE-RELATED |
| CAI8052963.1 | POLYKETIDE SYNTHASE-RELATED |
| CAI8052964.1 | POLYKETIDE SYNTHASE-RELATED |
| CAI8052965.1 | POLYKETIDE SYNTHASE-RELATED |
| CAI8052966.1 | 4-DIPHOSPHOCYTIDYL-2-C-METHYL-D-ERYTHRITOL KINASE, CHLOROPLASTIC |
| CAI8052968.1 | DIMETHYLADENOSINE TRANSFERASE |
| CAI8052967.1 | DIMETHYLADENOSINE TRANSFERASE |
| CAI8052969.1 | DIMETHYLADENOSINE TRANSFERASE |
| CAI8052970.1 | UTP--GLUCOSE-1-PHOSPHATE URIDYLYLTRANSFERASE |
