About Geodia barretti

Geodia barretti is a species of deep-sea sponge in the family Geodiidae, commonly found in cold-water ecosystems of the North Atlantic Ocean. This species thrives in nutrient-rich, cold-water environments and plays a crucial role in deep-sea ecosystems by filtering large volumes of water, contributing to nutrient cycling, and providing habitat for various marine organisms. Its unique adaptations to cold and high-pressure conditions make it an important subject for studying deep-sea biodiversity and ecological processes.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Geodia barrettiPoriferadeep-sea spongeDeep sea30-2000Kosterfjord National Park, Sweden, West of Yttre Vattenholmen (58.876233, 11.101483)519541

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Geodia_barretti_n_2022_12144.8MbScaffold2024CASHTH01pharmaceutical biosciences, uppsala universityPRJEB5804671.50%31,884

References
TitleJournalPubmed ID
Whole genome sequence of the deep-sea sponge Geodia barretti (Metazoa, Porifera, Demospongiae)G3 (Bethesda)37619978

Gene Information

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Gene IDDescription
CAI8053069.1IQ DOMAIN-CONTAINING PROTEIN H
CAI8053068.1IQ DOMAIN-CONTAINING PROTEIN H
CAI8053073.1TNF RECEPTOR ASSOCIATED FACTOR
CAI8053075.1
CAI8053074.1
CAI8053077.1NEPHRIN
CAI8053076.1NEPHRIN
CAI8053079.1CTX-RELATED TYPE I TRANSMEMBRANE PROTEIN
CAI8053078.1NEPHRIN
CAI8053080.1GLYCOSYLTRANSFERASE 14 FAMILY MEMBER
CAI8053081.1
CAI8053082.1
CAI8053084.1
CAI8053085.1
CAI8053083.1
CAI8053086.1
CAI8053087.1
CAI8053088.1
CAI8053089.1
CAI8053090.1ANKYRIN REPEAT DOMAIN-CONTAINING PROTEIN 39-RELATED
CAI8053094.1SODIUM/CALCIUM EXCHANGER
CAI8053095.1SODIUM/CALCIUM EXCHANGER
CAI8053093.1SODIUM/CALCIUM EXCHANGER
CAI8053096.1SODIUM/CALCIUM EXCHANGER
CAI8053092.1
CAI8053091.1
CAI8053097.1
CAI8053098.1
CAI8053099.1
CAI8053101.1
CAI8053100.1
CAI8053102.1
CAI8053104.1INTERLEUKIN ENHANCER-BINDING FACTOR
CAI8053103.1
CAI8053105.1
CAI8053106.1
CAI8053107.1
CAI8053108.1SODIUM/CALCIUM EXCHANGER
CAI8053109.1
CAI8053110.1DISCOIDIN, CUB, EGF, LAMININ , AND ZINC METALLOPROTEASE DOMAIN CONTAINING
CAI8053112.1NEPHRIN
CAI8053111.1VASCULAR CELL ADHESION MOLECULE 1
CAI8053115.1
CAI8053114.1
CAI8053113.1
CAI8053116.1
CAI8053117.1
CAI8053119.1REPRESSOR OF YIELD OF DENV PROTEIN
CAI8053118.1
CAI8053120.1
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