Geodia barretti is a species of deep-sea sponge in the family Geodiidae, commonly found in cold-water ecosystems of the North Atlantic Ocean. This species thrives in nutrient-rich, cold-water environments and plays a crucial role in deep-sea ecosystems by filtering large volumes of water, contributing to nutrient cycling, and providing habitat for various marine organisms. Its unique adaptations to cold and high-pressure conditions make it an important subject for studying deep-sea biodiversity and ecological processes.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Geodia barretti | Porifera | deep-sea sponge | Deep sea | 30-2000 | Kosterfjord National Park, Sweden, West of Yttre Vattenholmen (58.876233, 11.101483) | 519541 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| Geodia_barretti_n_2022_12 | 144.8Mb | Scaffold | 2024 | CASHTH01 | pharmaceutical biosciences, uppsala university | PRJEB58046 | 71.50% | 31,884 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Whole genome sequence of the deep-sea sponge Geodia barretti (Metazoa, Porifera, Demospongiae) | G3 (Bethesda) | 37619978 |
| Gene ID | Description |
|---|---|
| CAI8052971.1 | TRANSLATION FACTOR GUF1-RELATED |
| CAI8052972.1 | |
| CAI8052973.1 | |
| CAI8052975.1 | SODIUM/CALCIUM EXCHANGER |
| CAI8052976.1 | SODIUM/CALCIUM EXCHANGER |
| CAI8052977.1 | SODIUM/CALCIUM EXCHANGER |
| CAI8052974.1 | ADHESION G-PROTEIN COUPLED RECEPTOR V1 |
| CAI8052978.1 | SODIUM/CALCIUM EXCHANGER |
| CAI8052979.1 | SODIUM/CALCIUM EXCHANGER |
| CAI8052980.1 | RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE |
| CAI8052981.1 | |
| CAI8052982.1 | |
| CAI8052983.1 | |
| CAI8052986.1 | |
| CAI8052984.1 | |
| CAI8052985.1 | |
| CAI8052987.1 | |
| CAI8052988.1 | |
| CAI8052995.1 | RAB GTPASE-ACTIVATING PROTEIN 1-LIKE |
| CAI8052994.1 | RAB GTPASE-ACTIVATING PROTEIN 1-LIKE |
| CAI8052993.1 | RAB GTPASE-ACTIVATING PROTEIN 1-LIKE |
| CAI8052996.1 | RAB GTPASE-ACTIVATING PROTEIN 1-LIKE |
| CAI8052992.1 | RAB GTPASE-ACTIVATING PROTEIN 1-LIKE |
| CAI8052991.1 | RAB GTPASE-ACTIVATING PROTEIN 1-LIKE |
| CAI8052990.1 | RAB GTPASE-ACTIVATING PROTEIN 1-LIKE |
| CAI8052989.1 | RAB GTPASE-ACTIVATING PROTEIN 1-LIKE |
| CAI8052997.1 | RAB GTPASE-ACTIVATING PROTEIN 1-LIKE |
| CAI8052998.1 | RAB GTPASE-ACTIVATING PROTEIN 1-LIKE |
| CAI8052999.1 | |
| CAI8053000.1 | |
| CAI8053007.1 | INTERLEUKIN-27 SUBUNIT BETA |
| CAI8053003.1 | CYTOKINE RECEPTOR |
| CAI8053001.1 | CYTOKINE RECEPTOR |
| CAI8053002.1 | CYTOKINE RECEPTOR |
| CAI8053004.1 | CYTOKINE RECEPTOR |
| CAI8053005.1 | CYTOKINE RECEPTOR |
| CAI8053006.1 | CYTOKINE RECEPTOR |
| CAI8053008.1 | |
| CAI8053009.1 | |
| CAI8053011.1 | VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN VPS13 |
| CAI8053010.1 | VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN VPS13 |
| CAI8053014.1 | VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN VPS13 |
| CAI8053013.1 | VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN VPS13 |
| CAI8053012.1 | VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN VPS13 |
| CAI8053016.1 | VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN VPS13 |
| CAI8053015.1 | VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN VPS13 |
| CAI8053017.1 | VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN VPS13 |
| CAI8053021.1 | |
| CAI8053019.1 | |
| CAI8053020.1 |
