Geodia barretti is a species of deep-sea sponge in the family Geodiidae, commonly found in cold-water ecosystems of the North Atlantic Ocean. This species thrives in nutrient-rich, cold-water environments and plays a crucial role in deep-sea ecosystems by filtering large volumes of water, contributing to nutrient cycling, and providing habitat for various marine organisms. Its unique adaptations to cold and high-pressure conditions make it an important subject for studying deep-sea biodiversity and ecological processes.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Geodia barretti | Porifera | deep-sea sponge | Deep sea | 30-2000 | Kosterfjord National Park, Sweden, West of Yttre Vattenholmen (58.876233, 11.101483) | 519541 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| Geodia_barretti_n_2022_12 | 144.8Mb | Scaffold | 2024 | CASHTH01 | pharmaceutical biosciences, uppsala university | PRJEB58046 | 71.50% | 31,884 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Whole genome sequence of the deep-sea sponge Geodia barretti (Metazoa, Porifera, Demospongiae) | G3 (Bethesda) | 37619978 |
| Gene ID | Description |
|---|---|
| CAI8051921.1 | |
| CAI8051920.1 | |
| CAI8051922.1 | |
| CAI8051924.1 | |
| CAI8051925.1 | |
| CAI8051926.1 | |
| CAI8051930.1 | |
| CAI8051929.1 | |
| CAI8051932.1 | |
| CAI8051931.1 | |
| CAI8051928.1 | |
| CAI8051927.1 | |
| CAI8051933.1 | |
| CAI8051934.1 | |
| CAI8051935.1 | |
| CAI8051937.1 | PROTEIN PHOSPHATASE 2C |
| CAI8051938.1 | PROTEIN PHOSPHATASE 2C |
| CAI8051936.1 | |
| CAI8051941.1 | SPECTRIN/FILAMIN RELATED CYTOSKELETAL PROTEIN |
| CAI8051942.1 | SPECTRIN/FILAMIN RELATED CYTOSKELETAL PROTEIN |
| CAI8051940.1 | |
| CAI8051939.1 | |
| CAI8051943.1 | SPECTRIN/FILAMIN RELATED CYTOSKELETAL PROTEIN |
| CAI8051944.1 | HYPOTHETICAL HEAT DOMAIN-CONTAINING |
| CAI8051945.1 | HYPOTHETICAL HEAT DOMAIN-CONTAINING |
| CAI8051946.1 | |
| CAI8051948.1 | UNCHARACTERIZED |
| CAI8051947.1 | UNCHARACTERIZED |
| CAI8051949.1 | |
| CAI8051950.1 | |
| CAI8051952.1 | PINSTRIPE, ISOFORM A |
| CAI8051953.1 | PINSTRIPE, ISOFORM A |
| CAI8051951.1 | PINSTRIPE, ISOFORM A |
| CAI8051954.1 | PINSTRIPE, ISOFORM A |
| CAI8051957.1 | HISTONE ACETYLTRANSFERASE |
| CAI8051955.1 | HISTONE ACETYLTRANSFERASE |
| CAI8051956.1 | HISTONE ACETYLTRANSFERASE |
| CAI8051958.1 | HISTONE ACETYLTRANSFERASE |
| CAI8051959.1 | HISTONE ACETYLTRANSFERASE |
| CAI8051960.1 | HISTONE ACETYLTRANSFERASE |
| CAI8051961.1 | HISTONE ACETYLTRANSFERASE |
| CAI8051962.1 | RIBONUCLEASE Y |
| CAI8051963.1 | |
| CAI8051964.1 | |
| CAI8051965.1 | MALE-ENHANCED ANTIGEN-1 |
| CAI8051966.1 | MALE-ENHANCED ANTIGEN-1 |
| CAI8051968.1 | MITOCHONDRIAL IMPORT RECEPTOR SUBUNIT TOM20 |
| CAI8051967.1 | MITOCHONDRIAL IMPORT RECEPTOR SUBUNIT TOM20 |
| CAI8051969.1 | |
| CAI8051972.1 | NUCLEAR MITOTIC APPARATUS PROTEIN 1-RELATED |
