Geodia barretti is a species of deep-sea sponge in the family Geodiidae, commonly found in cold-water ecosystems of the North Atlantic Ocean. This species thrives in nutrient-rich, cold-water environments and plays a crucial role in deep-sea ecosystems by filtering large volumes of water, contributing to nutrient cycling, and providing habitat for various marine organisms. Its unique adaptations to cold and high-pressure conditions make it an important subject for studying deep-sea biodiversity and ecological processes.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Geodia barretti | Porifera | deep-sea sponge | Deep sea | 30-2000 | Kosterfjord National Park, Sweden, West of Yttre Vattenholmen (58.876233, 11.101483) | 519541 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| Geodia_barretti_n_2022_12 | 144.8Mb | Scaffold | 2024 | CASHTH01 | pharmaceutical biosciences, uppsala university | PRJEB58046 | 71.50% | 31,884 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Whole genome sequence of the deep-sea sponge Geodia barretti (Metazoa, Porifera, Demospongiae) | G3 (Bethesda) | 37619978 |
| Gene ID | Description |
|---|---|
| CAI8051671.1 | |
| CAI8051672.1 | |
| CAI8051674.1 | EUKARYOTIC TRANSLATION INITIATION FACTOR 2-ALPHA KINASE EIF2-ALPHA KINASE -RELATED |
| CAI8051673.1 | EUKARYOTIC TRANSLATION INITIATION FACTOR 2-ALPHA KINASE EIF2-ALPHA KINASE -RELATED |
| CAI8051675.1 | EUKARYOTIC TRANSLATION INITIATION FACTOR 2-ALPHA KINASE EIF2-ALPHA KINASE -RELATED |
| CAI8051676.1 | EUKARYOTIC TRANSLATION INITIATION FACTOR 2-ALPHA KINASE EIF2-ALPHA KINASE -RELATED |
| CAI8051677.1 | EUKARYOTIC TRANSLATION INITIATION FACTOR 2-ALPHA KINASE EIF2-ALPHA KINASE -RELATED |
| CAI8051678.1 | SPLICING FACTOR 3B SUBUNIT 4 |
| CAI8051679.1 | SPLICING FACTOR 3B SUBUNIT 4 |
| CAI8051680.1 | SPLICING FACTOR 3B SUBUNIT 4 |
| CAI8051681.1 | SPLICING FACTOR 3B SUBUNIT 4 |
| CAI8051682.1 | SPLICING FACTOR 3B SUBUNIT 4 |
| CAI8051684.1 | ASPARTYL/LYSYL-TRNA SYNTHETASE |
| CAI8051683.1 | ASPARTYL/LYSYL-TRNA SYNTHETASE |
| CAI8051685.1 | DYNACTIN SUBUNIT 3 |
| CAI8051686.1 | RAS-RELATED PROTEIN RAB |
| CAI8051687.1 | RAS-RELATED PROTEIN RAB |
| CAI8051690.1 | HYALURONAN MEDIATED MOTILITY RECEPTOR |
| CAI8051688.1 | HYALURONAN MEDIATED MOTILITY RECEPTOR |
| CAI8051689.1 | HYALURONAN MEDIATED MOTILITY RECEPTOR |
| CAI8051691.1 | |
| CAI8051696.1 | |
| CAI8051695.1 | |
| CAI8051697.1 | |
| CAI8051694.1 | |
| CAI8051693.1 | |
| CAI8051692.1 | HOOK PROTEINS |
| CAI8051698.1 | |
| CAI8051699.1 | RNF121 PROTEIN |
| CAI8051700.1 | RNF121 PROTEIN |
| CAI8051701.1 | RNF121 PROTEIN |
| CAI8051702.1 | N-TERMINAL ACETYLTRANSFERASE-RELATED |
| CAI8051703.1 | CHLOROPLAST 50S RIBOSOMAL PROTEIN L22-RELATED |
| CAI8051704.1 | SMALL UBIQUITIN-RELATED MODIFIER |
| CAI8051706.1 | WW DOMAIN BINDING PROTEIN 4 |
| CAI8051705.1 | WW DOMAIN BINDING PROTEIN 4 |
| CAI8051709.1 | TYROSINE-PROTEIN KINASE |
| CAI8051708.1 | TYROSINE-PROTEIN KINASE |
| CAI8051707.1 | TYROSINE-PROTEIN KINASE |
| CAI8051710.1 | TYROSINE-PROTEIN KINASE |
| CAI8051711.1 | TYROSINE-PROTEIN KINASE |
| CAI8051712.1 | TYROSINE-PROTEIN KINASE |
| CAI8051713.1 | TYROSINE-PROTEIN KINASE |
| CAI8051714.1 | TANDEM PH DOMAIN CONTAINING PROTEIN |
| CAI8051715.1 | TANDEM PH DOMAIN CONTAINING PROTEIN |
| CAI8051716.1 | ARFAPTIN-RELATED |
| CAI8051719.1 | PHOSPHOGLYCERATE KINASE |
| CAI8051718.1 | PHOSPHOGLYCERATE KINASE |
| CAI8051717.1 | PHOSPHOGLYCERATE KINASE |
| CAI8051720.1 | PHOSPHOGLYCERATE KINASE |
