Geodia barretti is a species of deep-sea sponge in the family Geodiidae, commonly found in cold-water ecosystems of the North Atlantic Ocean. This species thrives in nutrient-rich, cold-water environments and plays a crucial role in deep-sea ecosystems by filtering large volumes of water, contributing to nutrient cycling, and providing habitat for various marine organisms. Its unique adaptations to cold and high-pressure conditions make it an important subject for studying deep-sea biodiversity and ecological processes.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Geodia barretti | Porifera | deep-sea sponge | Deep sea | 30-2000 | Kosterfjord National Park, Sweden, West of Yttre Vattenholmen (58.876233, 11.101483) | 519541 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| Geodia_barretti_n_2022_12 | 144.8Mb | Scaffold | 2024 | CASHTH01 | pharmaceutical biosciences, uppsala university | PRJEB58046 | 71.50% | 31,884 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Whole genome sequence of the deep-sea sponge Geodia barretti (Metazoa, Porifera, Demospongiae) | G3 (Bethesda) | 37619978 |
| Gene ID | Description |
|---|---|
| CAI8051820.1 | AROM/DEHYDROQUINATE SYNTHASE |
| CAI8051822.1 | PREPHENATE DEHYDROGENASE |
| CAI8051823.1 | L-SERYL-TRNA(SEC) SELENIUM TRANSFERASE |
| CAI8051827.1 | POLYKETIDE SYNTHASE-RELATED |
| CAI8051826.1 | POLYKETIDE SYNTHASE-RELATED |
| CAI8051825.1 | POLYKETIDE SYNTHASE-RELATED |
| CAI8051824.1 | POLYKETIDE SYNTHASE-RELATED |
| CAI8051828.1 | |
| CAI8051829.1 | SUCCINATE--HYDROXYMETHYLGLUTARATE COA-TRANSFERASE |
| CAI8051831.1 | EUKARYOTIC TRANSLATION INITIATION FACTOR 2-ALPHA KINASE EIF2-ALPHA KINASE -RELATED |
| CAI8051830.1 | EUKARYOTIC TRANSLATION INITIATION FACTOR 2-ALPHA KINASE EIF2-ALPHA KINASE -RELATED |
| CAI8051832.1 | EUKARYOTIC TRANSLATION INITIATION FACTOR 2-ALPHA KINASE EIF2-ALPHA KINASE -RELATED |
| CAI8051833.1 | EUKARYOTIC TRANSLATION INITIATION FACTOR 2-ALPHA KINASE EIF2-ALPHA KINASE -RELATED |
| CAI8051834.1 | EUKARYOTIC TRANSLATION INITIATION FACTOR 2-ALPHA KINASE EIF2-ALPHA KINASE -RELATED |
| CAI8051835.1 | - |
| CAI8051836.1 | - |
| CAI8051837.1 | |
| CAI8051838.1 | |
| CAI8051839.1 | |
| CAI8051841.1 | G KINASE ANCHORING PROTEIN 1 |
| CAI8051840.1 | |
| CAI8051842.1 | |
| CAI8051843.1 | |
| CAI8051844.1 | |
| CAI8051845.1 | |
| CAI8051848.1 | MAJOR FACILITATOR SUPERFAMILY TRANSPORTER 16, ISOFORM B |
| CAI8051847.1 | MAJOR FACILITATOR SUPERFAMILY TRANSPORTER 16, ISOFORM B |
| CAI8051846.1 | MAJOR FACILITATOR SUPERFAMILY TRANSPORTER 16, ISOFORM B |
| CAI8051849.1 | CYTOSOLIC CARBOXYPEPTIDASE |
| CAI8051850.1 | CYTOSOLIC CARBOXYPEPTIDASE |
| CAI8051851.1 | CYTOSOLIC CARBOXYPEPTIDASE |
| CAI8051853.1 | CYTOSOLIC CARBOXYPEPTIDASE |
| CAI8051852.1 | |
| CAI8051854.1 | |
| CAI8051855.1 | |
| CAI8051857.1 | |
| CAI8051856.1 | |
| CAI8051858.1 | |
| CAI8051859.1 | OXIDOREDUCTASES |
| CAI8051861.1 | OXIDOREDUCTASES |
| CAI8051860.1 | OXIDOREDUCTASES |
| CAI8051864.1 | |
| CAI8051863.1 | |
| CAI8051865.1 | |
| CAI8051862.1 | |
| CAI8051866.1 | |
| CAI8051867.1 | CONDENSIN COMPLEX SUBUNIT 2 |
| CAI8051868.1 | |
| CAI8051869.1 | |
| CAI8051870.1 |
