Geodia barretti is a species of deep-sea sponge in the family Geodiidae, commonly found in cold-water ecosystems of the North Atlantic Ocean. This species thrives in nutrient-rich, cold-water environments and plays a crucial role in deep-sea ecosystems by filtering large volumes of water, contributing to nutrient cycling, and providing habitat for various marine organisms. Its unique adaptations to cold and high-pressure conditions make it an important subject for studying deep-sea biodiversity and ecological processes.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Geodia barretti | Porifera | deep-sea sponge | Deep sea | 30-2000 | Kosterfjord National Park, Sweden, West of Yttre Vattenholmen (58.876233, 11.101483) | 519541 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| Geodia_barretti_n_2022_12 | 144.8Mb | Scaffold | 2024 | CASHTH01 | pharmaceutical biosciences, uppsala university | PRJEB58046 | 71.50% | 31,884 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Whole genome sequence of the deep-sea sponge Geodia barretti (Metazoa, Porifera, Demospongiae) | G3 (Bethesda) | 37619978 |
| Gene ID | Description |
|---|---|
| CAI8051571.1 | |
| CAI8051573.1 | MAP/MICROTUBULE AFFINITY-REGULATING KINASE |
| CAI8051572.1 | MAP/MICROTUBULE AFFINITY-REGULATING KINASE |
| CAI8051574.1 | MAP/MICROTUBULE AFFINITY-REGULATING KINASE |
| CAI8051575.1 | MAP/MICROTUBULE AFFINITY-REGULATING KINASE |
| CAI8051576.1 | MAP/MICROTUBULE AFFINITY-REGULATING KINASE |
| CAI8051577.1 | |
| CAI8051578.1 | |
| CAI8051579.1 | |
| CAI8051584.1 | ENDO BETA N-ACETYLGLUCOSAMINIDASE |
| CAI8051583.1 | ENDO BETA N-ACETYLGLUCOSAMINIDASE |
| CAI8051581.1 | ENDO BETA N-ACETYLGLUCOSAMINIDASE |
| CAI8051582.1 | ENDO BETA N-ACETYLGLUCOSAMINIDASE |
| CAI8051580.1 | ENDO BETA N-ACETYLGLUCOSAMINIDASE |
| CAI8051585.1 | ENDO BETA N-ACETYLGLUCOSAMINIDASE |
| CAI8051586.1 | ENDO BETA N-ACETYLGLUCOSAMINIDASE |
| CAI8051588.1 | ENDO BETA N-ACETYLGLUCOSAMINIDASE |
| CAI8051587.1 | ENDO BETA N-ACETYLGLUCOSAMINIDASE |
| CAI8051589.1 | ENDO BETA N-ACETYLGLUCOSAMINIDASE |
| CAI8051590.1 | |
| CAI8051591.1 | |
| CAI8051593.1 | INNER MEMBRANE PROTEIN YGIH |
| CAI8051592.1 | INNER MEMBRANE PROTEIN YGIH |
| CAI8051599.1 | GTPASE DER |
| CAI8051596.1 | GTPASE DER |
| CAI8051597.1 | GTPASE DER |
| CAI8051595.1 | GTPASE DER |
| CAI8051598.1 | GTPASE DER |
| CAI8051594.1 | GTPASE DER |
| CAI8051600.1 | ORNITHINE CARBAMOYLTRANSFERASE, MITOCHONDRIAL |
| CAI8051601.1 | BLR0278 PROTEIN |
| CAI8051602.1 | C-1-TETRAHYDROFOLATE SYNTHASE, CYTOPLASMIC-RELATED |
| CAI8051603.1 | C-1-TETRAHYDROFOLATE SYNTHASE, CYTOPLASMIC-RELATED |
| CAI8051604.1 | S-ADENOSYLMETHIONINE:TRNA RIBOSYLTRANSFERASE-ISOMERASE |
| CAI8051605.1 | |
| CAI8051606.1 | FUMARYLACETOACETATE HYDROLASE DOMAIN-CONTAINING PROTEIN 2A-RELATED |
| CAI8051607.1 | |
| CAI8051608.1 | XYLOGLUCANASE (EUROFUNG) |
| CAI8051609.1 | LIPOPROTEIN-RELATED |
| CAI8051610.1 | OLIGOPEPTIDE TRANSPORT SYSTEM PERMEASE PROTEIN APPC |
| CAI8051612.1 | DIPEPTIDE TRANSPORT SYSTEM PERMEASE PROTEIN DPPB-RELATED |
| CAI8051611.1 | DIPEPTIDE TRANSPORT SYSTEM PERMEASE PROTEIN DPPB-RELATED |
| CAI8051613.1 | DIPEPTIDE TRANSPORT SYSTEM PERMEASE PROTEIN DPPB-RELATED |
| CAI8051614.1 | DIPEPTIDE TRANSPORT SYSTEM PERMEASE PROTEIN DPPB-RELATED |
| CAI8051615.1 | PERIPLASMIC BINDING COMPONENT OF ABC TRANSPORTER |
| CAI8051616.1 | ENOYL-COA HYDRATASE-RELATED |
| CAI8051617.1 | BACTERIAL HEMOLYSIN-LIKE PROTEIN |
| CAI8051618.1 | NICOTINAMIDE-NUCLEOTIDE AMIDOHYDROLASE PNCC |
| CAI8051619.1 | ALKANESULFONATE MONOOXYGENASE |
| CAI8051620.1 | PEPTIDASE S45 PENICILLIN AMIDASE |
