Geodia barretti is a species of deep-sea sponge in the family Geodiidae, commonly found in cold-water ecosystems of the North Atlantic Ocean. This species thrives in nutrient-rich, cold-water environments and plays a crucial role in deep-sea ecosystems by filtering large volumes of water, contributing to nutrient cycling, and providing habitat for various marine organisms. Its unique adaptations to cold and high-pressure conditions make it an important subject for studying deep-sea biodiversity and ecological processes.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Geodia barretti | Porifera | deep-sea sponge | Deep sea | 30-2000 | Kosterfjord National Park, Sweden, West of Yttre Vattenholmen (58.876233, 11.101483) | 519541 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| Geodia_barretti_n_2022_12 | 144.8Mb | Scaffold | 2024 | CASHTH01 | pharmaceutical biosciences, uppsala university | PRJEB58046 | 71.50% | 31,884 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Whole genome sequence of the deep-sea sponge Geodia barretti (Metazoa, Porifera, Demospongiae) | G3 (Bethesda) | 37619978 |
| Gene ID | Description |
|---|---|
| CAI8051420.1 | ADAM A DISINTEGRIN AND METALLOPROTEASE DOMAIN |
| CAI8051422.1 | |
| CAI8051424.1 | |
| CAI8051423.1 | |
| CAI8051425.1 | |
| CAI8051426.1 | |
| CAI8051427.1 | |
| CAI8051428.1 | UBIQUITIN LIGASE SPECIFICITY FACTOR/HREP PROTEIN |
| CAI8051429.1 | |
| CAI8051430.1 | |
| CAI8051434.1 | EPH RECEPTOR A5 |
| CAI8051435.1 | EPH RECEPTOR A5 |
| CAI8051431.1 | EPH RECEPTOR A5 |
| CAI8051433.1 | EPH RECEPTOR A5 |
| CAI8051432.1 | EPH RECEPTOR A5 |
| CAI8051442.1 | DNA2/NAM7 HELICASE FAMILY |
| CAI8051441.1 | DNA2/NAM7 HELICASE FAMILY |
| CAI8051440.1 | DNA2/NAM7 HELICASE FAMILY |
| CAI8051439.1 | DNA2/NAM7 HELICASE FAMILY |
| CAI8051438.1 | DNA2/NAM7 HELICASE FAMILY |
| CAI8051437.1 | DNA2/NAM7 HELICASE FAMILY |
| CAI8051436.1 | |
| CAI8051443.1 | DNA2/NAM7 HELICASE FAMILY |
| CAI8051444.1 | FAS-ASSOCIATING DEATH DOMAIN-CONTAINING PROTEIN FADD |
| CAI8051445.1 | CYTOCHROME B561/FERRIC REDUCTASE TRANSMEMBRANE |
| CAI8051446.1 | ADHESION G-PROTEIN COUPLED RECEPTOR |
| CAI8051447.1 | |
| CAI8051448.1 | LOQUACIOUS, ISOFORM B |
| CAI8051449.1 | PROTEIN SIDEKICK |
| CAI8051450.1 | PROTEIN SIDEKICK |
| CAI8051451.1 | |
| CAI8051452.1 | |
| CAI8051454.1 | FAD SYNTHETASE-RELATED FMN ADENYLYLTRANSFERASE |
| CAI8051453.1 | FAD SYNTHETASE-RELATED FMN ADENYLYLTRANSFERASE |
| CAI8051456.1 | |
| CAI8051455.1 | |
| CAI8051457.1 | |
| CAI8051458.1 | |
| CAI8051460.1 | |
| CAI8051461.1 | |
| CAI8051459.1 | |
| CAI8051464.1 | HEAT SHOCK PROTEIN 70KDA |
| CAI8051463.1 | HEAT SHOCK PROTEIN 70KDA |
| CAI8051462.1 | HEAT SHOCK PROTEIN 70KDA |
| CAI8051465.1 | HEAT SHOCK PROTEIN 70KDA |
| CAI8051467.1 | |
| CAI8051466.1 | |
| CAI8051469.1 | TETRATRICOPEPTIDE REPEAT PROTEIN (AFU_ORTHOLOGUE AFUA_6G03870) |
| CAI8051468.1 | TETRATRICOPEPTIDE REPEAT PROTEIN (AFU_ORTHOLOGUE AFUA_6G03870) |
| CAI8051470.1 |
