Geodia barretti is a species of deep-sea sponge in the family Geodiidae, commonly found in cold-water ecosystems of the North Atlantic Ocean. This species thrives in nutrient-rich, cold-water environments and plays a crucial role in deep-sea ecosystems by filtering large volumes of water, contributing to nutrient cycling, and providing habitat for various marine organisms. Its unique adaptations to cold and high-pressure conditions make it an important subject for studying deep-sea biodiversity and ecological processes.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Geodia barretti | Porifera | deep-sea sponge | Deep sea | 30-2000 | Kosterfjord National Park, Sweden, West of Yttre Vattenholmen (58.876233, 11.101483) | 519541 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| Geodia_barretti_n_2022_12 | 144.8Mb | Scaffold | 2024 | CASHTH01 | pharmaceutical biosciences, uppsala university | PRJEB58046 | 71.50% | 31,884 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Whole genome sequence of the deep-sea sponge Geodia barretti (Metazoa, Porifera, Demospongiae) | G3 (Bethesda) | 37619978 |
| Gene ID | Description |
|---|---|
| CAI8051321.1 | SOLUTE CARRIER FAMILY 35 |
| CAI8051322.1 | |
| CAI8051324.1 | ZINC FINGER DHHC DOMAIN CONTAINING PROTEIN |
| CAI8051325.1 | ZINC FINGER DHHC DOMAIN CONTAINING PROTEIN |
| CAI8051326.1 | PALMITOYLTRANSFERASE ZDHHC16 |
| CAI8051323.1 | |
| CAI8051327.1 | WD REPEAT-CONTAINING PROTEIN 97 |
| CAI8051328.1 | APOPTOTIC CHROMATIN CONDENSATION INDUCER IN THE NUCLEUS |
| CAI8051329.1 | UNCHARACTERIZED |
| CAI8051332.1 | TRNA-DIHYDROURIDINE(20) SYNTHASE [NAD(P)+]-LIKE |
| CAI8051331.1 | TRNA-DIHYDROURIDINE(20) SYNTHASE [NAD(P)+]-LIKE |
| CAI8051330.1 | |
| CAI8051333.1 | |
| CAI8051334.1 | |
| CAI8051337.1 | NOP2 YEAST -RELATED NOL1/NOP2/FMU SUN DOMAIN-CONTAINING |
| CAI8051338.1 | NOP2 YEAST -RELATED NOL1/NOP2/FMU SUN DOMAIN-CONTAINING |
| CAI8051336.1 | NOP2 YEAST -RELATED NOL1/NOP2/FMU SUN DOMAIN-CONTAINING |
| CAI8051335.1 | NOP2 YEAST -RELATED NOL1/NOP2/FMU SUN DOMAIN-CONTAINING |
| CAI8051339.1 | |
| CAI8051340.1 | |
| CAI8051341.1 | |
| CAI8051342.1 | UNCHARACTERIZED |
| CAI8051343.1 | |
| CAI8051345.1 | |
| CAI8051344.1 | |
| CAI8051346.1 | UNCHARACTERIZED |
| CAI8051347.1 | ARGININE-TRNA-PROTEIN TRANSFERASE 1 |
| CAI8051348.1 | |
| CAI8051349.1 | |
| CAI8051350.1 | |
| CAI8051351.1 | |
| CAI8051352.1 | |
| CAI8051353.1 | VILLIN |
| CAI8051354.1 | LETHAL 2 GIANT LARVAE PROTEIN |
| CAI8051355.1 | |
| CAI8051356.1 | CYSTEINE PROTEASE FAMILY C1-RELATED |
| CAI8051357.1 | ORGANIC SOLUTE TRANSPORTER-RELATED |
| CAI8051358.1 | |
| CAI8051359.1 | OLIGOPEPTIDE TRANSPORTER-RELATED |
| CAI8051360.1 | OLIGOPEPTIDE TRANSPORTER-RELATED |
| CAI8051361.1 | |
| CAI8051363.1 | OLIGOPEPTIDE TRANSPORTER-RELATED |
| CAI8051362.1 | OLIGOPEPTIDE TRANSPORTER-RELATED |
| CAI8051364.1 | OLIGOPEPTIDE TRANSPORTER-RELATED |
| CAI8051365.1 | OLIGOPEPTIDE TRANSPORTER-RELATED |
| CAI8051366.1 | OXIDOREDUCTASE-LIKE DOMAIN-CONTAINING PROTEIN 1 |
| CAI8051368.1 | OLIGOPEPTIDE TRANSPORTER-RELATED |
| CAI8051369.1 | UNCHARACTERIZED |
| CAI8051367.1 | UNCHARACTERIZED |
| CAI8051370.1 | OLIGOPEPTIDE TRANSPORTER-RELATED |
