Geodia barretti is a species of deep-sea sponge in the family Geodiidae, commonly found in cold-water ecosystems of the North Atlantic Ocean. This species thrives in nutrient-rich, cold-water environments and plays a crucial role in deep-sea ecosystems by filtering large volumes of water, contributing to nutrient cycling, and providing habitat for various marine organisms. Its unique adaptations to cold and high-pressure conditions make it an important subject for studying deep-sea biodiversity and ecological processes.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Geodia barretti | Porifera | deep-sea sponge | Deep sea | 30-2000 | Kosterfjord National Park, Sweden, West of Yttre Vattenholmen (58.876233, 11.101483) | 519541 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| Geodia_barretti_n_2022_12 | 144.8Mb | Scaffold | 2024 | CASHTH01 | pharmaceutical biosciences, uppsala university | PRJEB58046 | 71.50% | 31,884 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Whole genome sequence of the deep-sea sponge Geodia barretti (Metazoa, Porifera, Demospongiae) | G3 (Bethesda) | 37619978 |
| Gene ID | Description |
|---|---|
| CAI8051072.1 | UNCHARACTERIZED |
| CAI8051068.1 | UNCHARACTERIZED |
| CAI8051074.1 | UNCHARACTERIZED |
| CAI8051073.1 | UNCHARACTERIZED |
| CAI8051075.1 | UNCHARACTERIZED |
| CAI8051076.1 | UNCHARACTERIZED |
| CAI8051077.1 | |
| CAI8051078.1 | |
| CAI8051089.1 | |
| CAI8051088.1 | |
| CAI8051090.1 | |
| CAI8051091.1 | |
| CAI8051086.1 | NACHT, LRR AND PYD DOMAINS-CONTAINING PROTEIN 12 |
| CAI8051085.1 | NACHT, LRR AND PYD DOMAINS-CONTAINING PROTEIN 12 |
| CAI8051082.1 | NACHT, LRR AND PYD DOMAINS-CONTAINING PROTEIN 12 |
| CAI8051084.1 | NACHT, LRR AND PYD DOMAINS-CONTAINING PROTEIN 12 |
| CAI8051081.1 | NACHT, LRR AND PYD DOMAINS-CONTAINING PROTEIN 12 |
| CAI8051083.1 | NACHT, LRR AND PYD DOMAINS-CONTAINING PROTEIN 12 |
| CAI8051079.1 | NACHT, LRR AND PYD DOMAINS-CONTAINING PROTEIN 12 |
| CAI8051080.1 | NACHT, LRR AND PYD DOMAINS-CONTAINING PROTEIN 12 |
| CAI8051087.1 | NACHT, LRR AND PYD DOMAINS-CONTAINING PROTEIN 12 |
| CAI8051092.1 | PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE |
| CAI8051093.1 | |
| CAI8051097.1 | SRCR DOMAIN-CONTAINING PROTEIN |
| CAI8051095.1 | SRCR DOMAIN-CONTAINING PROTEIN |
| CAI8051098.1 | SRCR DOMAIN-CONTAINING PROTEIN |
| CAI8051100.1 | SRCR DOMAIN-CONTAINING PROTEIN |
| CAI8051099.1 | SRCR DOMAIN-CONTAINING PROTEIN |
| CAI8051101.1 | SRCR DOMAIN-CONTAINING PROTEIN |
| CAI8051096.1 | SRCR DOMAIN-CONTAINING PROTEIN |
| CAI8051102.1 | SRCR DOMAIN-CONTAINING PROTEIN |
| CAI8051103.1 | SRCR DOMAIN-CONTAINING PROTEIN |
| CAI8051094.1 | TYROSINE SPECIFIC PROTEIN PHOSPHATASE AND DUAL SPECIFICITY PROTEIN PHOSPHATASE |
| CAI8051104.1 | COMM DOMAIN CONTAINING PROTEIN 5 |
| CAI8051109.1 | RING FINGER PROTEIN 127 |
| CAI8051108.1 | RING FINGER PROTEIN 127 |
| CAI8051107.1 | RING FINGER PROTEIN 127 |
| CAI8051106.1 | RING FINGER PROTEIN 127 |
| CAI8051105.1 | |
| CAI8051111.1 | RING FINGER PROTEIN 127 |
| CAI8051110.1 | RING FINGER PROTEIN 127 |
| CAI8051112.1 | RING FINGER PROTEIN 127 |
| CAI8051113.1 | FARNESYLCYSTEINE LYASE |
| CAI8051117.1 | SRCR DOMAIN-CONTAINING PROTEIN |
| CAI8051116.1 | SRCR DOMAIN-CONTAINING PROTEIN |
| CAI8051115.1 | SRCR DOMAIN-CONTAINING PROTEIN |
| CAI8051114.1 | SRCR DOMAIN-CONTAINING PROTEIN |
| CAI8051118.1 | SRCR DOMAIN-CONTAINING PROTEIN |
| CAI8051119.1 | SCAVENGER RECEPTOR DOMAIN-CONTAINING |
| CAI8051120.1 | SCAVENGER RECEPTOR DOMAIN-CONTAINING |
